Protein–RNA interactions for Protein: Q80V63

Prdm4, PR domain zinc finger protein 4, mousemouse

Predictions only

Length 803 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prdm4Q80V63 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Prdm4Q80V63 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Prdm4Q80V63 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC15.11■□□□□ 0.01
Prdm4Q80V63 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Prdm4Q80V63 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC15.11■□□□□ 0.01
Prdm4Q80V63 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Prdm4Q80V63 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Prdm4Q80V63 Gm43514-201ENSMUST00000198852 424 ntBASIC15.11■□□□□ 0.01
Prdm4Q80V63 Gm6443-201ENSMUST00000203599 874 ntBASIC15.11■□□□□ 0.01
Prdm4Q80V63 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC15.11■□□□□ 0.01
Prdm4Q80V63 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC15.11■□□□□ 0.01
Prdm4Q80V63 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC15.11■□□□□ 0.01
Prdm4Q80V63 Rbfox2-207ENSMUST00000227533 1041 ntBASIC15.11■□□□□ 0.01
Prdm4Q80V63 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Prdm4Q80V63 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Prdm4Q80V63 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Prdm4Q80V63 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Prdm4Q80V63 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Prdm4Q80V63 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Prdm4Q80V63 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Prdm4Q80V63 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Prdm4Q80V63 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Prdm4Q80V63 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Prdm4Q80V63 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Prdm4Q80V63 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Prdm4Q80V63 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Prdm4Q80V63 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Prdm4Q80V63 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Prdm4Q80V63 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC15.1■□□□□ 0.01
Prdm4Q80V63 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Prdm4Q80V63 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
Prdm4Q80V63 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Prdm4Q80V63 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Prdm4Q80V63 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Prdm4Q80V63 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Prdm4Q80V63 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Prdm4Q80V63 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Prdm4Q80V63 Gm8344-201ENSMUST00000119813 856 ntBASIC15.1■□□□□ 0.01
Prdm4Q80V63 Gm12644-201ENSMUST00000119935 606 ntBASIC15.1■□□□□ 0.01
Prdm4Q80V63 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC15.1■□□□□ 0.01
Prdm4Q80V63 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC15.1■□□□□ 0.01
Prdm4Q80V63 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Prdm4Q80V63 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC15.1■□□□□ 0.01
Prdm4Q80V63 AC164629.2-201ENSMUST00000217916 270 ntBASIC15.1■□□□□ 0.01
Prdm4Q80V63 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC15.1■□□□□ 0.01
Prdm4Q80V63 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Prdm4Q80V63 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Prdm4Q80V63 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Prdm4Q80V63 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Prdm4Q80V63 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Prdm4Q80V63 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Prdm4Q80V63 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Prdm4Q80V63 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC15.09■□□□□ 0.01
Prdm4Q80V63 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC15.09■□□□□ 0.01
Prdm4Q80V63 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Prdm4Q80V63 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC15.09■□□□□ 0.01
Prdm4Q80V63 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Prdm4Q80V63 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Prdm4Q80V63 Gm14722-201ENSMUST00000118943 689 ntBASIC15.09■□□□□ 0.01
Prdm4Q80V63 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Prdm4Q80V63 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Prdm4Q80V63 Gm27867-201ENSMUST00000184778 125 ntBASIC15.09■□□□□ 0.01
Prdm4Q80V63 Gm5864-201ENSMUST00000202263 970 ntBASIC15.09■□□□□ 0.01
Prdm4Q80V63 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC15.09■□□□□ 0.01
Prdm4Q80V63 Gm19164-201ENSMUST00000210667 640 ntBASIC15.09■□□□□ 0.01
Prdm4Q80V63 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Prdm4Q80V63 Birc2-201ENSMUST00000054878 378 ntBASIC15.09■□□□□ 0.01
Prdm4Q80V63 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Prdm4Q80V63 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Prdm4Q80V63 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC15.09■□□□□ 0.01
Prdm4Q80V63 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Prdm4Q80V63 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Prdm4Q80V63 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Prdm4Q80V63 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Prdm4Q80V63 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Prdm4Q80V63 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC15.09■□□□□ 0.01
Prdm4Q80V63 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Prdm4Q80V63 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Prdm4Q80V63 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Prdm4Q80V63 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC15.08■□□□□ 0.01
Prdm4Q80V63 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC15.08■□□□□ 0.01
Prdm4Q80V63 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Prdm4Q80V63 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Prdm4Q80V63 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Prdm4Q80V63 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0.01
Prdm4Q80V63 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Prdm4Q80V63 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Prdm4Q80V63 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC15.08■□□□□ 0.01
Prdm4Q80V63 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Prdm4Q80V63 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Prdm4Q80V63 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC15.08■□□□□ 0
Prdm4Q80V63 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Prdm4Q80V63 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC15.08■□□□□ 0
Prdm4Q80V63 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Prdm4Q80V63 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Prdm4Q80V63 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Prdm4Q80V63 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC15.08■□□□□ 0
Prdm4Q80V63 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Prdm4Q80V63 Gm4459-201ENSMUST00000118750 468 ntBASIC15.08■□□□□ 0
Prdm4Q80V63 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC15.08■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms