Protein–RNA interactions for Protein: Q6PFE3

Rad54b, DNA repair and recombination protein RAD54B, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rad54bQ6PFE3 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Rad54bQ6PFE3 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC14.59□□□□□ -0.07
Rad54bQ6PFE3 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Rad54bQ6PFE3 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Rad54bQ6PFE3 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
Rad54bQ6PFE3 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Rad54bQ6PFE3 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Rad54bQ6PFE3 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Rad54bQ6PFE3 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Rad54bQ6PFE3 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC14.58□□□□□ -0.07
Rad54bQ6PFE3 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rad54bQ6PFE3 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rad54bQ6PFE3 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rad54bQ6PFE3 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rad54bQ6PFE3 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rad54bQ6PFE3 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rad54bQ6PFE3 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rad54bQ6PFE3 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rad54bQ6PFE3 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC14.58□□□□□ -0.08
Rad54bQ6PFE3 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC14.58□□□□□ -0.08
Rad54bQ6PFE3 Gm5479-201ENSMUST00000160578 435 ntBASIC14.58□□□□□ -0.08
Rad54bQ6PFE3 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Rad54bQ6PFE3 Mir5131-201ENSMUST00000175426 93 ntBASIC14.58□□□□□ -0.08
Rad54bQ6PFE3 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Rad54bQ6PFE3 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rad54bQ6PFE3 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC14.58□□□□□ -0.08
Rad54bQ6PFE3 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
Rad54bQ6PFE3 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC14.58□□□□□ -0.08
Rad54bQ6PFE3 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Rad54bQ6PFE3 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rad54bQ6PFE3 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rad54bQ6PFE3 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rad54bQ6PFE3 Gm38102-201ENSMUST00000192791 1935 ntBASIC14.58□□□□□ -0.08
Rad54bQ6PFE3 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rad54bQ6PFE3 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rad54bQ6PFE3 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
Rad54bQ6PFE3 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rad54bQ6PFE3 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rad54bQ6PFE3 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rad54bQ6PFE3 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rad54bQ6PFE3 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rad54bQ6PFE3 Gm43056-201ENSMUST00000197865 2791 ntBASIC14.57□□□□□ -0.08
Rad54bQ6PFE3 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Rad54bQ6PFE3 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rad54bQ6PFE3 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Rad54bQ6PFE3 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC14.57□□□□□ -0.08
Rad54bQ6PFE3 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Rad54bQ6PFE3 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rad54bQ6PFE3 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Rad54bQ6PFE3 Gm10275-202ENSMUST00000168697 495 ntBASIC14.57□□□□□ -0.08
Rad54bQ6PFE3 Gm8584-201ENSMUST00000171982 758 ntBASIC14.57□□□□□ -0.08
Rad54bQ6PFE3 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Rad54bQ6PFE3 Mir7036b-201ENSMUST00000184791 63 ntBASIC14.57□□□□□ -0.08
Rad54bQ6PFE3 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC14.57□□□□□ -0.08
Rad54bQ6PFE3 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rad54bQ6PFE3 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC14.57□□□□□ -0.08
Rad54bQ6PFE3 Gm10275-201ENSMUST00000092620 635 ntBASIC14.57□□□□□ -0.08
Rad54bQ6PFE3 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Rad54bQ6PFE3 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rad54bQ6PFE3 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Rad54bQ6PFE3 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Rad54bQ6PFE3 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rad54bQ6PFE3 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rad54bQ6PFE3 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rad54bQ6PFE3 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rad54bQ6PFE3 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Rad54bQ6PFE3 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Rad54bQ6PFE3 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Rad54bQ6PFE3 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Rad54bQ6PFE3 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rad54bQ6PFE3 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rad54bQ6PFE3 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Rad54bQ6PFE3 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Rad54bQ6PFE3 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rad54bQ6PFE3 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rad54bQ6PFE3 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rad54bQ6PFE3 AC154527.4-201ENSMUST00000224364 1667 ntBASIC14.56□□□□□ -0.08
Rad54bQ6PFE3 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rad54bQ6PFE3 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rad54bQ6PFE3 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Rad54bQ6PFE3 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rad54bQ6PFE3 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
Rad54bQ6PFE3 Gm12350-201ENSMUST00000121208 462 ntBASIC14.56□□□□□ -0.08
Rad54bQ6PFE3 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Rad54bQ6PFE3 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rad54bQ6PFE3 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC14.56□□□□□ -0.08
Rad54bQ6PFE3 Gm9449-201ENSMUST00000207265 1011 ntBASIC14.56□□□□□ -0.08
Rad54bQ6PFE3 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Rad54bQ6PFE3 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rad54bQ6PFE3 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rad54bQ6PFE3 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rad54bQ6PFE3 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rad54bQ6PFE3 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rad54bQ6PFE3 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rad54bQ6PFE3 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Rad54bQ6PFE3 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
Rad54bQ6PFE3 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rad54bQ6PFE3 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rad54bQ6PFE3 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rad54bQ6PFE3 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 59.8 ms