Protein–RNA interactions for Protein: P63024

Vamp3, Vesicle-associated membrane protein 3, mousemouse

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vamp3P63024 Tanc1-201ENSMUST00000037526 7873 ntAPPRIS P3 TSL 5 BASIC11.06□□□□□ -0.64
Vamp3P63024 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Vamp3P63024 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Vamp3P63024 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Vamp3P63024 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Vamp3P63024 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Vamp3P63024 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC11.06□□□□□ -0.64
Vamp3P63024 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Vamp3P63024 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Vamp3P63024 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Vamp3P63024 Gm15039-201ENSMUST00000118914 875 ntBASIC11.06□□□□□ -0.64
Vamp3P63024 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC11.06□□□□□ -0.64
Vamp3P63024 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Vamp3P63024 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC11.06□□□□□ -0.64
Vamp3P63024 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC11.06□□□□□ -0.64
Vamp3P63024 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Vamp3P63024 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Vamp3P63024 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC11.06□□□□□ -0.64
Vamp3P63024 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Vamp3P63024 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Vamp3P63024 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Vamp3P63024 Setd1a-201ENSMUST00000047075 6487 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Vamp3P63024 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Vamp3P63024 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Vamp3P63024 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC11.06□□□□□ -0.64
Vamp3P63024 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Vamp3P63024 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC11.06□□□□□ -0.64
Vamp3P63024 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
Vamp3P63024 Gm35040-201ENSMUST00000206829 5094 ntTSL 2 BASIC11.06□□□□□ -0.64
Vamp3P63024 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Vamp3P63024 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Vamp3P63024 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Vamp3P63024 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC11.05□□□□□ -0.64
Vamp3P63024 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Vamp3P63024 Gm43417-201ENSMUST00000201586 5207 ntBASIC11.05□□□□□ -0.64
Vamp3P63024 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Vamp3P63024 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Vamp3P63024 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Vamp3P63024 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC11.05□□□□□ -0.64
Vamp3P63024 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC11.05□□□□□ -0.64
Vamp3P63024 Gm10728-201ENSMUST00000194292 1829 ntBASIC11.05□□□□□ -0.64
Vamp3P63024 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Vamp3P63024 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Vamp3P63024 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Vamp3P63024 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Vamp3P63024 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Vamp3P63024 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Vamp3P63024 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Vamp3P63024 Setx-201ENSMUST00000061578 10970 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Vamp3P63024 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC11.05□□□□□ -0.64
Vamp3P63024 Gm43017-201ENSMUST00000198296 752 ntBASIC11.05□□□□□ -0.64
Vamp3P63024 Gm44450-201ENSMUST00000199528 114 ntBASIC11.05□□□□□ -0.64
Vamp3P63024 Gm42545-201ENSMUST00000202755 922 ntBASIC11.05□□□□□ -0.64
Vamp3P63024 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC11.05□□□□□ -0.64
Vamp3P63024 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Vamp3P63024 Gm18025-201ENSMUST00000221733 862 ntBASIC11.05□□□□□ -0.64
Vamp3P63024 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC11.05□□□□□ -0.64
Vamp3P63024 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Vamp3P63024 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Vamp3P63024 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Vamp3P63024 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Vamp3P63024 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Vamp3P63024 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Vamp3P63024 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Vamp3P63024 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC11.05□□□□□ -0.64
Vamp3P63024 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Vamp3P63024 AC126250.1-201ENSMUST00000228343 1768 ntBASIC11.05□□□□□ -0.64
Vamp3P63024 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC11.05□□□□□ -0.64
Vamp3P63024 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Vamp3P63024 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Vamp3P63024 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC11.05□□□□□ -0.64
Vamp3P63024 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Vamp3P63024 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Vamp3P63024 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Vamp3P63024 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Vamp3P63024 Gm7002-201ENSMUST00000221386 2165 ntBASIC11.04□□□□□ -0.64
Vamp3P63024 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Vamp3P63024 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Vamp3P63024 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Vamp3P63024 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC11.04□□□□□ -0.64
Vamp3P63024 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Vamp3P63024 Gpr17-201ENSMUST00000064016 5195 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Vamp3P63024 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Vamp3P63024 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Vamp3P63024 Gm42480-201ENSMUST00000198434 2595 ntBASIC11.04□□□□□ -0.64
Vamp3P63024 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
Vamp3P63024 Gm27194-201ENSMUST00000175753 2936 ntBASIC11.04□□□□□ -0.64
Vamp3P63024 Pck2-205ENSMUST00000226352 2784 ntBASIC11.04□□□□□ -0.64
Vamp3P63024 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Vamp3P63024 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Vamp3P63024 Nom1-201ENSMUST00000001611 9219 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Vamp3P63024 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
Vamp3P63024 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC11.04□□□□□ -0.64
Vamp3P63024 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC11.04□□□□□ -0.64
Vamp3P63024 Alkbh1-212ENSMUST00000185301 408 ntBASIC11.04□□□□□ -0.64
Vamp3P63024 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Vamp3P63024 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC11.04□□□□□ -0.64
Vamp3P63024 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC11.04□□□□□ -0.64
Vamp3P63024 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Vamp3P63024 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 49.8 ms