Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sox3P53784 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC13.9□□□□□ -0.18
Sox3P53784 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC13.9□□□□□ -0.18
Sox3P53784 Gm6888-201ENSMUST00000221983 706 ntBASIC13.9□□□□□ -0.18
Sox3P53784 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Sox3P53784 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sox3P53784 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sox3P53784 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sox3P53784 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sox3P53784 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sox3P53784 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC13.9□□□□□ -0.18
Sox3P53784 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Sox3P53784 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Sox3P53784 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sox3P53784 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sox3P53784 Gm10710-201ENSMUST00000047876 3971 ntBASIC13.9□□□□□ -0.18
Sox3P53784 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC13.9□□□□□ -0.18
Sox3P53784 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Sox3P53784 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sox3P53784 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sox3P53784 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC13.9□□□□□ -0.19
Sox3P53784 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Sox3P53784 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Sox3P53784 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC13.89□□□□□ -0.19
Sox3P53784 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sox3P53784 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sox3P53784 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sox3P53784 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Sox3P53784 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sox3P53784 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC13.89□□□□□ -0.19
Sox3P53784 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Sox3P53784 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Sox3P53784 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sox3P53784 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sox3P53784 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC13.89□□□□□ -0.19
Sox3P53784 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Sox3P53784 Gm14719-201ENSMUST00000121891 340 ntBASIC13.89□□□□□ -0.19
Sox3P53784 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC13.89□□□□□ -0.19
Sox3P53784 Gm16215-201ENSMUST00000161990 637 ntBASIC13.89□□□□□ -0.19
Sox3P53784 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Sox3P53784 Gm28631-201ENSMUST00000190740 334 ntBASIC13.89□□□□□ -0.19
Sox3P53784 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sox3P53784 Gm44855-201ENSMUST00000205725 362 ntBASIC13.89□□□□□ -0.19
Sox3P53784 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sox3P53784 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sox3P53784 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sox3P53784 Gm44291-201ENSMUST00000203102 2865 ntBASIC13.89□□□□□ -0.19
Sox3P53784 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sox3P53784 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sox3P53784 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sox3P53784 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sox3P53784 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sox3P53784 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Sox3P53784 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Sox3P53784 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sox3P53784 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Sox3P53784 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sox3P53784 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sox3P53784 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sox3P53784 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sox3P53784 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sox3P53784 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Sox3P53784 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Sox3P53784 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sox3P53784 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Sox3P53784 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Sox3P53784 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sox3P53784 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sox3P53784 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sox3P53784 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sox3P53784 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Sox3P53784 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Sox3P53784 Gm13517-201ENSMUST00000120782 1495 ntBASIC13.88□□□□□ -0.19
Sox3P53784 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sox3P53784 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sox3P53784 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Sox3P53784 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Sox3P53784 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sox3P53784 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sox3P53784 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sox3P53784 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC13.88□□□□□ -0.19
Sox3P53784 Gm2272-201ENSMUST00000194903 582 ntBASIC13.88□□□□□ -0.19
Sox3P53784 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC13.88□□□□□ -0.19
Sox3P53784 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC13.88□□□□□ -0.19
Sox3P53784 AC158538.2-201ENSMUST00000225455 906 ntBASIC13.88□□□□□ -0.19
Sox3P53784 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sox3P53784 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sox3P53784 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Sox3P53784 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sox3P53784 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Sox3P53784 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sox3P53784 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sox3P53784 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sox3P53784 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC13.88□□□□□ -0.19
Sox3P53784 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Sox3P53784 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sox3P53784 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC13.88□□□□□ -0.19
Sox3P53784 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Sox3P53784 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Sox3P53784 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 42.9 ms