Protein–RNA interactions for Protein: P49135

Ercc3, General transcription and DNA repair factor IIH helicase subunit XPB, mousemouse

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc3P49135 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ercc3P49135 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC17.2■□□□□ 0.34
Ercc3P49135 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ercc3P49135 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ercc3P49135 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Ercc3P49135 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ercc3P49135 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC17.2■□□□□ 0.34
Ercc3P49135 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC17.2■□□□□ 0.34
Ercc3P49135 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ercc3P49135 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ercc3P49135 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ercc3P49135 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ercc3P49135 Gm37297-201ENSMUST00000192974 2384 ntBASIC17.2■□□□□ 0.34
Ercc3P49135 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Ercc3P49135 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Ercc3P49135 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ercc3P49135 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ercc3P49135 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ercc3P49135 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC17.19■□□□□ 0.34
Ercc3P49135 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ercc3P49135 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ercc3P49135 Gm38294-201ENSMUST00000192831 381 ntBASIC17.19■□□□□ 0.34
Ercc3P49135 AC131710.1-201ENSMUST00000228336 990 ntBASIC17.19■□□□□ 0.34
Ercc3P49135 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ercc3P49135 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ercc3P49135 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ercc3P49135 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Ercc3P49135 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ercc3P49135 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC17.19■□□□□ 0.34
Ercc3P49135 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Ercc3P49135 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ercc3P49135 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Ercc3P49135 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ercc3P49135 Gm42934-201ENSMUST00000196920 1345 ntBASIC17.19■□□□□ 0.34
Ercc3P49135 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ercc3P49135 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ercc3P49135 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ercc3P49135 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Ercc3P49135 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ercc3P49135 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ercc3P49135 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ercc3P49135 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC17.18■□□□□ 0.34
Ercc3P49135 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC17.18■□□□□ 0.34
Ercc3P49135 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ercc3P49135 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC17.18■□□□□ 0.34
Ercc3P49135 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ercc3P49135 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ercc3P49135 Mir449b-201ENSMUST00000104833 80 ntBASIC17.18■□□□□ 0.34
Ercc3P49135 Gm13616-201ENSMUST00000120600 222 ntBASIC17.18■□□□□ 0.34
Ercc3P49135 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC17.18■□□□□ 0.34
Ercc3P49135 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Ercc3P49135 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ercc3P49135 Gm29541-201ENSMUST00000191351 678 ntBASIC17.18■□□□□ 0.34
Ercc3P49135 Gm7774-201ENSMUST00000200064 533 ntBASIC17.18■□□□□ 0.34
Ercc3P49135 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ercc3P49135 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ercc3P49135 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Ercc3P49135 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ercc3P49135 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ercc3P49135 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ercc3P49135 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ercc3P49135 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Ercc3P49135 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ercc3P49135 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ercc3P49135 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Ercc3P49135 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ercc3P49135 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ercc3P49135 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ercc3P49135 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ercc3P49135 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ercc3P49135 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ercc3P49135 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Ercc3P49135 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ercc3P49135 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ercc3P49135 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC17.17■□□□□ 0.34
Ercc3P49135 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ercc3P49135 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ercc3P49135 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC17.17■□□□□ 0.34
Ercc3P49135 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC17.17■□□□□ 0.34
Ercc3P49135 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ercc3P49135 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Ercc3P49135 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Ercc3P49135 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Ercc3P49135 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ercc3P49135 Gm22065-201ENSMUST00000103753 110 ntBASIC17.17■□□□□ 0.34
Ercc3P49135 Gm22066-201ENSMUST00000103761 110 ntBASIC17.17■□□□□ 0.34
Ercc3P49135 Gm24932-201ENSMUST00000103763 110 ntBASIC17.17■□□□□ 0.34
Ercc3P49135 Gm24115-201ENSMUST00000103799 110 ntBASIC17.17■□□□□ 0.34
Ercc3P49135 Gm22190-201ENSMUST00000103827 110 ntBASIC17.17■□□□□ 0.34
Ercc3P49135 Gm22191-201ENSMUST00000103831 110 ntBASIC17.17■□□□□ 0.34
Ercc3P49135 Gm24721-201ENSMUST00000103849 110 ntBASIC17.17■□□□□ 0.34
Ercc3P49135 Gm28018-201ENSMUST00000103869 110 ntBASIC17.17■□□□□ 0.34
Ercc3P49135 Gm26399-201ENSMUST00000103937 110 ntBASIC17.17■□□□□ 0.34
Ercc3P49135 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC17.17■□□□□ 0.34
Ercc3P49135 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Ercc3P49135 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC17.17■□□□□ 0.34
Ercc3P49135 Gm25349-201ENSMUST00000177728 110 ntBASIC17.17■□□□□ 0.34
Ercc3P49135 Gm23616-201ENSMUST00000177797 110 ntBASIC17.17■□□□□ 0.34
Ercc3P49135 Gm25871-201ENSMUST00000177816 110 ntBASIC17.17■□□□□ 0.34
Ercc3P49135 Gm24752-201ENSMUST00000178240 110 ntBASIC17.17■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms