Protein–RNA interactions for Protein: P39689

Cdkn1a, Cyclin-dependent kinase inhibitor 1, mousemouse

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkn1aP39689 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Cdkn1aP39689 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cdkn1aP39689 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Cdkn1aP39689 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC11.95□□□□□ -0.5
Cdkn1aP39689 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC11.95□□□□□ -0.5
Cdkn1aP39689 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Cdkn1aP39689 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Cdkn1aP39689 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC11.95□□□□□ -0.5
Cdkn1aP39689 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Cdkn1aP39689 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC11.95□□□□□ -0.5
Cdkn1aP39689 Gm27306-201ENSMUST00000183970 107 ntBASIC11.95□□□□□ -0.5
Cdkn1aP39689 Gm27321-201ENSMUST00000185021 205 ntBASIC11.95□□□□□ -0.5
Cdkn1aP39689 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC11.95□□□□□ -0.5
Cdkn1aP39689 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Cdkn1aP39689 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Cdkn1aP39689 Gm44344-201ENSMUST00000200287 129 ntBASIC11.95□□□□□ -0.5
Cdkn1aP39689 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC11.95□□□□□ -0.5
Cdkn1aP39689 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC11.95□□□□□ -0.5
Cdkn1aP39689 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Cdkn1aP39689 AC149588.3-201ENSMUST00000227515 150 ntBASIC11.95□□□□□ -0.5
Cdkn1aP39689 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC11.95□□□□□ -0.5
Cdkn1aP39689 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cdkn1aP39689 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cdkn1aP39689 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cdkn1aP39689 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cdkn1aP39689 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cdkn1aP39689 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cdkn1aP39689 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cdkn1aP39689 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cdkn1aP39689 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cdkn1aP39689 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Cdkn1aP39689 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cdkn1aP39689 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cdkn1aP39689 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC11.95□□□□□ -0.5
Cdkn1aP39689 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Cdkn1aP39689 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cdkn1aP39689 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Cdkn1aP39689 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Cdkn1aP39689 AC174678.1-201ENSMUST00000228007 2749 ntBASIC11.95□□□□□ -0.5
Cdkn1aP39689 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cdkn1aP39689 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Cdkn1aP39689 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Cdkn1aP39689 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cdkn1aP39689 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cdkn1aP39689 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Cdkn1aP39689 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cdkn1aP39689 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cdkn1aP39689 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cdkn1aP39689 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Cdkn1aP39689 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cdkn1aP39689 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cdkn1aP39689 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cdkn1aP39689 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cdkn1aP39689 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cdkn1aP39689 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Cdkn1aP39689 Mir1897-201ENSMUST00000122581 272 ntBASIC11.94□□□□□ -0.5
Cdkn1aP39689 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Cdkn1aP39689 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Cdkn1aP39689 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cdkn1aP39689 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Cdkn1aP39689 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC11.94□□□□□ -0.5
Cdkn1aP39689 Gm5626-201ENSMUST00000222151 1058 ntBASIC11.94□□□□□ -0.5
Cdkn1aP39689 Shd-206ENSMUST00000225145 998 ntBASIC11.94□□□□□ -0.5
Cdkn1aP39689 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cdkn1aP39689 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cdkn1aP39689 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cdkn1aP39689 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Cdkn1aP39689 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cdkn1aP39689 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cdkn1aP39689 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cdkn1aP39689 AC148324.1-201ENSMUST00000219034 4240 ntBASIC11.94□□□□□ -0.5
Cdkn1aP39689 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cdkn1aP39689 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC11.94□□□□□ -0.5
Cdkn1aP39689 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cdkn1aP39689 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC11.94□□□□□ -0.5
Cdkn1aP39689 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC11.94□□□□□ -0.5
Cdkn1aP39689 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC11.94□□□□□ -0.5
Cdkn1aP39689 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cdkn1aP39689 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cdkn1aP39689 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Cdkn1aP39689 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cdkn1aP39689 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cdkn1aP39689 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Cdkn1aP39689 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Cdkn1aP39689 AC124751.1-201ENSMUST00000222716 1408 ntBASIC11.94□□□□□ -0.5
Cdkn1aP39689 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cdkn1aP39689 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cdkn1aP39689 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cdkn1aP39689 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cdkn1aP39689 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cdkn1aP39689 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cdkn1aP39689 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cdkn1aP39689 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Cdkn1aP39689 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cdkn1aP39689 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC11.93□□□□□ -0.5
Cdkn1aP39689 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC11.93□□□□□ -0.5
Cdkn1aP39689 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cdkn1aP39689 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Cdkn1aP39689 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cdkn1aP39689 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms