Protein–RNA interactions for Protein: P20334

Tnfrsf9, Tumor necrosis factor receptor superfamily member 9, mousemouse

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf9P20334 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC11.91□□□□□ -0.5
Tnfrsf9P20334 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC11.91□□□□□ -0.5
Tnfrsf9P20334 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC11.91□□□□□ -0.5
Tnfrsf9P20334 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Tnfrsf9P20334 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Tnfrsf9P20334 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Tnfrsf9P20334 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Tnfrsf9P20334 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Tnfrsf9P20334 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Tnfrsf9P20334 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Tnfrsf9P20334 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Tnfrsf9P20334 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Tnfrsf9P20334 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Tnfrsf9P20334 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Tnfrsf9P20334 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Tnfrsf9P20334 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC11.91□□□□□ -0.5
Tnfrsf9P20334 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Tnfrsf9P20334 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC11.91□□□□□ -0.5
Tnfrsf9P20334 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Tnfrsf9P20334 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Tnfrsf9P20334 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Tnfrsf9P20334 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Tnfrsf9P20334 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Tnfrsf9P20334 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Tnfrsf9P20334 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Tnfrsf9P20334 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Tnfrsf9P20334 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Tnfrsf9P20334 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Tnfrsf9P20334 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Tnfrsf9P20334 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Tnfrsf9P20334 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Tnfrsf9P20334 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Tnfrsf9P20334 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Tnfrsf9P20334 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Tnfrsf9P20334 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Tnfrsf9P20334 Gm11569-201ENSMUST00000105057 869 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Tnfrsf9P20334 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Tnfrsf9P20334 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC11.9□□□□□ -0.5
Tnfrsf9P20334 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Tnfrsf9P20334 Gm13410-201ENSMUST00000117058 1415 ntBASIC11.9□□□□□ -0.5
Tnfrsf9P20334 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Tnfrsf9P20334 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Tnfrsf9P20334 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC11.9□□□□□ -0.5
Tnfrsf9P20334 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Tnfrsf9P20334 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Tnfrsf9P20334 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Tnfrsf9P20334 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC11.9□□□□□ -0.5
Tnfrsf9P20334 AC142191.1-201ENSMUST00000219217 699 ntTSL 5 BASIC11.9□□□□□ -0.5
Tnfrsf9P20334 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Tnfrsf9P20334 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Tnfrsf9P20334 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Tnfrsf9P20334 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Tnfrsf9P20334 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Tnfrsf9P20334 Asic1-205ENSMUST00000228185 1818 ntBASIC11.9□□□□□ -0.5
Tnfrsf9P20334 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Tnfrsf9P20334 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Tnfrsf9P20334 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC11.9□□□□□ -0.51
Tnfrsf9P20334 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
Tnfrsf9P20334 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.51
Tnfrsf9P20334 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC11.9□□□□□ -0.51
Tnfrsf9P20334 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Tnfrsf9P20334 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Tnfrsf9P20334 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Tnfrsf9P20334 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Tnfrsf9P20334 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Tnfrsf9P20334 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC11.89□□□□□ -0.51
Tnfrsf9P20334 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Tnfrsf9P20334 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Tnfrsf9P20334 Gm37736-201ENSMUST00000193564 2802 ntBASIC11.89□□□□□ -0.51
Tnfrsf9P20334 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Tnfrsf9P20334 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Tnfrsf9P20334 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Tnfrsf9P20334 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Tnfrsf9P20334 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC11.89□□□□□ -0.51
Tnfrsf9P20334 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Tnfrsf9P20334 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC11.89□□□□□ -0.51
Tnfrsf9P20334 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Tnfrsf9P20334 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Tnfrsf9P20334 Gm38294-201ENSMUST00000192831 381 ntBASIC11.89□□□□□ -0.51
Tnfrsf9P20334 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC11.89□□□□□ -0.51
Tnfrsf9P20334 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Tnfrsf9P20334 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Tnfrsf9P20334 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Tnfrsf9P20334 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Tnfrsf9P20334 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Tnfrsf9P20334 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Tnfrsf9P20334 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Tnfrsf9P20334 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Tnfrsf9P20334 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Tnfrsf9P20334 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Tnfrsf9P20334 Gm37305-201ENSMUST00000195714 4279 ntBASIC11.89□□□□□ -0.51
Tnfrsf9P20334 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Tnfrsf9P20334 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Tnfrsf9P20334 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Tnfrsf9P20334 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Tnfrsf9P20334 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Tnfrsf9P20334 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Tnfrsf9P20334 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC11.89□□□□□ -0.51
Tnfrsf9P20334 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Tnfrsf9P20334 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC11.89□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 46.5 ms