Protein–RNA interactions for Protein: P09633

Hoxc9, Homeobox protein Hox-C9, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc9P09633 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Hoxc9P09633 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Hoxc9P09633 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Hoxc9P09633 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Hoxc9P09633 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Hoxc9P09633 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC18.65■□□□□ 0.58
Hoxc9P09633 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Hoxc9P09633 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.58
Hoxc9P09633 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Hoxc9P09633 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.58
Hoxc9P09633 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC18.64■□□□□ 0.58
Hoxc9P09633 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Hoxc9P09633 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.58
Hoxc9P09633 Efs-202ENSMUST00000227037 2540 ntBASIC18.64■□□□□ 0.57
Hoxc9P09633 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Hoxc9P09633 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Hoxc9P09633 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Hoxc9P09633 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Hoxc9P09633 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Hoxc9P09633 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Hoxc9P09633 Gm15824-201ENSMUST00000119516 955 ntBASIC18.64■□□□□ 0.57
Hoxc9P09633 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC18.64■□□□□ 0.57
Hoxc9P09633 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Hoxc9P09633 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC18.64■□□□□ 0.57
Hoxc9P09633 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
Hoxc9P09633 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC18.64■□□□□ 0.57
Hoxc9P09633 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Hoxc9P09633 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC18.64■□□□□ 0.57
Hoxc9P09633 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC18.64■□□□□ 0.57
Hoxc9P09633 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Hoxc9P09633 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Hoxc9P09633 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Hoxc9P09633 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Hoxc9P09633 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Hoxc9P09633 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Hoxc9P09633 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Hoxc9P09633 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Hoxc9P09633 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Hoxc9P09633 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Hoxc9P09633 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Hoxc9P09633 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Hoxc9P09633 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Hoxc9P09633 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Hoxc9P09633 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Hoxc9P09633 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Hoxc9P09633 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Hoxc9P09633 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Hoxc9P09633 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Hoxc9P09633 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Hoxc9P09633 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Hoxc9P09633 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Hoxc9P09633 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
Hoxc9P09633 Gm5912-201ENSMUST00000122282 1438 ntBASIC18.63■□□□□ 0.57
Hoxc9P09633 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Hoxc9P09633 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Hoxc9P09633 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Hoxc9P09633 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Hoxc9P09633 Gm14451-201ENSMUST00000121581 1542 ntBASIC18.63■□□□□ 0.57
Hoxc9P09633 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Hoxc9P09633 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
Hoxc9P09633 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Hoxc9P09633 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Hoxc9P09633 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Hoxc9P09633 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC18.62■□□□□ 0.57
Hoxc9P09633 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Hoxc9P09633 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Hoxc9P09633 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Hoxc9P09633 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Hoxc9P09633 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
Hoxc9P09633 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Hoxc9P09633 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Hoxc9P09633 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Hoxc9P09633 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Hoxc9P09633 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Hoxc9P09633 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Hoxc9P09633 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Hoxc9P09633 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Hoxc9P09633 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC18.62■□□□□ 0.57
Hoxc9P09633 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Hoxc9P09633 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Hoxc9P09633 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Hoxc9P09633 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Hoxc9P09633 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Hoxc9P09633 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC18.62■□□□□ 0.57
Hoxc9P09633 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Hoxc9P09633 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Hoxc9P09633 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Hoxc9P09633 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Hoxc9P09633 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Hoxc9P09633 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC18.61■□□□□ 0.57
Hoxc9P09633 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC18.61■□□□□ 0.57
Hoxc9P09633 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Hoxc9P09633 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC18.61■□□□□ 0.57
Hoxc9P09633 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Hoxc9P09633 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC18.61■□□□□ 0.57
Hoxc9P09633 AC155258.1-201ENSMUST00000219303 253 ntBASIC18.61■□□□□ 0.57
Hoxc9P09633 AC139350.3-201ENSMUST00000226151 420 ntBASIC18.61■□□□□ 0.57
Hoxc9P09633 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Hoxc9P09633 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Hoxc9P09633 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms