Protein–RNA interactions for Protein: O88384

Vti1b, Vesicle transport through interaction with t-SNAREs homolog 1B, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1bO88384 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Vti1bO88384 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
Vti1bO88384 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Vti1bO88384 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Vti1bO88384 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Vti1bO88384 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.19
Vti1bO88384 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC13.83□□□□□ -0.19
Vti1bO88384 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Vti1bO88384 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Vti1bO88384 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Vti1bO88384 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Vti1bO88384 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC13.83□□□□□ -0.2
Vti1bO88384 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC13.83□□□□□ -0.2
Vti1bO88384 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Vti1bO88384 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Vti1bO88384 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC13.83□□□□□ -0.2
Vti1bO88384 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC13.83□□□□□ -0.2
Vti1bO88384 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC13.83□□□□□ -0.2
Vti1bO88384 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Vti1bO88384 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Vti1bO88384 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Vti1bO88384 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Vti1bO88384 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Vti1bO88384 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC13.83□□□□□ -0.2
Vti1bO88384 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Vti1bO88384 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Vti1bO88384 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Vti1bO88384 Gm13294-201ENSMUST00000121757 1330 ntBASIC13.83□□□□□ -0.2
Vti1bO88384 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Vti1bO88384 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Vti1bO88384 AC119177.1-201ENSMUST00000227647 1332 ntBASIC13.83□□□□□ -0.2
Vti1bO88384 AC122901.1-201ENSMUST00000214203 1790 ntBASIC13.83□□□□□ -0.2
Vti1bO88384 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Vti1bO88384 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Vti1bO88384 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Vti1bO88384 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC13.83□□□□□ -0.2
Vti1bO88384 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Vti1bO88384 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Vti1bO88384 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Vti1bO88384 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Vti1bO88384 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Vti1bO88384 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Vti1bO88384 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Vti1bO88384 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Vti1bO88384 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Vti1bO88384 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC13.82□□□□□ -0.2
Vti1bO88384 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Vti1bO88384 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Vti1bO88384 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Vti1bO88384 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Vti1bO88384 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Vti1bO88384 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
Vti1bO88384 Gm14140-201ENSMUST00000119999 995 ntBASIC13.82□□□□□ -0.2
Vti1bO88384 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Vti1bO88384 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Vti1bO88384 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Vti1bO88384 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Vti1bO88384 Gm18246-201ENSMUST00000221023 728 ntBASIC13.82□□□□□ -0.2
Vti1bO88384 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Vti1bO88384 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Vti1bO88384 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Vti1bO88384 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Vti1bO88384 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC13.82□□□□□ -0.2
Vti1bO88384 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
Vti1bO88384 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Vti1bO88384 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Vti1bO88384 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Vti1bO88384 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Vti1bO88384 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Vti1bO88384 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Vti1bO88384 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Vti1bO88384 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
Vti1bO88384 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Vti1bO88384 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Vti1bO88384 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Vti1bO88384 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Vti1bO88384 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC13.82□□□□□ -0.2
Vti1bO88384 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Vti1bO88384 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Vti1bO88384 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Vti1bO88384 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Vti1bO88384 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Vti1bO88384 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Vti1bO88384 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Vti1bO88384 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC13.81□□□□□ -0.2
Vti1bO88384 Gm37019-201ENSMUST00000192133 2134 ntBASIC13.81□□□□□ -0.2
Vti1bO88384 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Vti1bO88384 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Vti1bO88384 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC13.81□□□□□ -0.2
Vti1bO88384 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Vti1bO88384 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC13.81□□□□□ -0.2
Vti1bO88384 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
Vti1bO88384 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC13.81□□□□□ -0.2
Vti1bO88384 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC13.81□□□□□ -0.2
Vti1bO88384 Gm5364-201ENSMUST00000216789 889 ntBASIC13.81□□□□□ -0.2
Vti1bO88384 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Vti1bO88384 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Vti1bO88384 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Vti1bO88384 Gm13857-203ENSMUST00000150561 2337 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Vti1bO88384 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 66.7 ms