Protein–RNA interactions for Protein: O55203

Ldb2, LIM domain-binding protein 2, mousemouse

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb2O55203 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC14.41□□□□□ -0.1
Ldb2O55203 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC14.41□□□□□ -0.1
Ldb2O55203 Gm10275-201ENSMUST00000092620 635 ntBASIC14.41□□□□□ -0.1
Ldb2O55203 Gm45760-201ENSMUST00000212190 1782 ntBASIC14.41□□□□□ -0.1
Ldb2O55203 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ldb2O55203 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ldb2O55203 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Ldb2O55203 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Ldb2O55203 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ldb2O55203 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC14.41□□□□□ -0.1
Ldb2O55203 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ldb2O55203 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ldb2O55203 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ldb2O55203 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Ldb2O55203 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Ldb2O55203 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ldb2O55203 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ldb2O55203 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ldb2O55203 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ldb2O55203 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ldb2O55203 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Ldb2O55203 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ldb2O55203 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ldb2O55203 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC14.4□□□□□ -0.1
Ldb2O55203 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ldb2O55203 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC14.4□□□□□ -0.1
Ldb2O55203 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Ldb2O55203 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ldb2O55203 Gm23935-201ENSMUST00000102303 57 ntBASIC14.4□□□□□ -0.1
Ldb2O55203 Gm24270-201ENSMUST00000102326 57 ntBASIC14.4□□□□□ -0.1
Ldb2O55203 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
Ldb2O55203 Gm24245-201ENSMUST00000157318 57 ntBASIC14.4□□□□□ -0.1
Ldb2O55203 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ldb2O55203 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Ldb2O55203 Ighv8-7-201ENSMUST00000194349 297 ntBASIC14.4□□□□□ -0.1
Ldb2O55203 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC14.4□□□□□ -0.1
Ldb2O55203 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ldb2O55203 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ldb2O55203 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ldb2O55203 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Ldb2O55203 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ldb2O55203 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ldb2O55203 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC14.4□□□□□ -0.1
Ldb2O55203 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ldb2O55203 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ldb2O55203 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ldb2O55203 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ldb2O55203 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ldb2O55203 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.11
Ldb2O55203 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ldb2O55203 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ldb2O55203 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
Ldb2O55203 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ldb2O55203 Gm45630-201ENSMUST00000210243 1911 ntBASIC14.39□□□□□ -0.11
Ldb2O55203 CT025626.1-201ENSMUST00000223735 1455 ntBASIC14.39□□□□□ -0.11
Ldb2O55203 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ldb2O55203 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ldb2O55203 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ldb2O55203 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ldb2O55203 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC14.39□□□□□ -0.11
Ldb2O55203 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ldb2O55203 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Ldb2O55203 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC14.39□□□□□ -0.11
Ldb2O55203 Mir6990-201ENSMUST00000183724 91 ntBASIC14.39□□□□□ -0.11
Ldb2O55203 Gm38225-201ENSMUST00000194001 393 ntBASIC14.39□□□□□ -0.11
Ldb2O55203 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC14.39□□□□□ -0.11
Ldb2O55203 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ldb2O55203 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ldb2O55203 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Ldb2O55203 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ldb2O55203 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ldb2O55203 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC14.39□□□□□ -0.11
Ldb2O55203 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ldb2O55203 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC14.39□□□□□ -0.11
Ldb2O55203 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ldb2O55203 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ldb2O55203 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ldb2O55203 Gm42466-201ENSMUST00000202099 1301 ntBASIC14.39□□□□□ -0.11
Ldb2O55203 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ldb2O55203 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ldb2O55203 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ldb2O55203 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Ldb2O55203 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC14.38□□□□□ -0.11
Ldb2O55203 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ldb2O55203 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ldb2O55203 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ldb2O55203 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Ldb2O55203 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Ldb2O55203 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC14.38□□□□□ -0.11
Ldb2O55203 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ldb2O55203 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ldb2O55203 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ldb2O55203 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ldb2O55203 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ldb2O55203 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ldb2O55203 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ldb2O55203 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ldb2O55203 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Ldb2O55203 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ldb2O55203 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC14.38□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms