Protein–RNA interactions for Protein: B5KM66

Syce3, Synaptonemal complex central element protein 3, mousemouse

Predictions only

Length 88 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syce3B5KM66 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC16.59■□□□□ 0.25
Syce3B5KM66 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC16.59■□□□□ 0.25
Syce3B5KM66 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC16.59■□□□□ 0.25
Syce3B5KM66 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Syce3B5KM66 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Syce3B5KM66 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC16.58■□□□□ 0.25
Syce3B5KM66 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Syce3B5KM66 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Syce3B5KM66 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Syce3B5KM66 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Syce3B5KM66 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Syce3B5KM66 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Syce3B5KM66 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Syce3B5KM66 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Syce3B5KM66 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Syce3B5KM66 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Syce3B5KM66 Gm7935-201ENSMUST00000100555 1278 ntBASIC16.58■□□□□ 0.24
Syce3B5KM66 Gm15372-201ENSMUST00000120729 834 ntBASIC16.58■□□□□ 0.24
Syce3B5KM66 Gm9726-201ENSMUST00000180321 678 ntBASIC16.58■□□□□ 0.24
Syce3B5KM66 AC153889.1-201ENSMUST00000219257 330 ntBASIC16.58■□□□□ 0.24
Syce3B5KM66 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC16.58■□□□□ 0.24
Syce3B5KM66 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC16.58■□□□□ 0.24
Syce3B5KM66 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Syce3B5KM66 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Syce3B5KM66 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Syce3B5KM66 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Syce3B5KM66 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Syce3B5KM66 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Syce3B5KM66 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Syce3B5KM66 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Syce3B5KM66 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Syce3B5KM66 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC16.58■□□□□ 0.24
Syce3B5KM66 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Syce3B5KM66 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Syce3B5KM66 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Syce3B5KM66 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Syce3B5KM66 Gm38346-201ENSMUST00000192379 2639 ntBASIC16.57■□□□□ 0.24
Syce3B5KM66 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Syce3B5KM66 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Syce3B5KM66 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Syce3B5KM66 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Syce3B5KM66 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Syce3B5KM66 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Syce3B5KM66 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Syce3B5KM66 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Syce3B5KM66 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Syce3B5KM66 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Syce3B5KM66 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Syce3B5KM66 Gm11780-201ENSMUST00000136880 516 ntBASIC16.57■□□□□ 0.24
Syce3B5KM66 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC16.57■□□□□ 0.24
Syce3B5KM66 Gm2308-201ENSMUST00000166539 1004 ntBASIC16.57■□□□□ 0.24
Syce3B5KM66 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Syce3B5KM66 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Syce3B5KM66 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Syce3B5KM66 AC151836.1-202ENSMUST00000226259 753 ntBASIC16.57■□□□□ 0.24
Syce3B5KM66 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Syce3B5KM66 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Syce3B5KM66 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Syce3B5KM66 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Syce3B5KM66 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Syce3B5KM66 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Syce3B5KM66 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Syce3B5KM66 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Syce3B5KM66 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC16.57■□□□□ 0.24
Syce3B5KM66 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Syce3B5KM66 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Syce3B5KM66 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Syce3B5KM66 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Syce3B5KM66 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Syce3B5KM66 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Syce3B5KM66 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Syce3B5KM66 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Syce3B5KM66 Il17rd-203ENSMUST00000225146 3366 ntBASIC16.57■□□□□ 0.24
Syce3B5KM66 AC121801.1-201ENSMUST00000225363 1899 ntBASIC16.56■□□□□ 0.24
Syce3B5KM66 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Syce3B5KM66 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Syce3B5KM66 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC16.56■□□□□ 0.24
Syce3B5KM66 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Syce3B5KM66 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC16.56■□□□□ 0.24
Syce3B5KM66 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Syce3B5KM66 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Syce3B5KM66 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Syce3B5KM66 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Syce3B5KM66 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC16.56■□□□□ 0.24
Syce3B5KM66 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Syce3B5KM66 Gm18489-201ENSMUST00000172565 551 ntBASIC16.56■□□□□ 0.24
Syce3B5KM66 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC16.56■□□□□ 0.24
Syce3B5KM66 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Syce3B5KM66 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Syce3B5KM66 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Syce3B5KM66 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Syce3B5KM66 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Syce3B5KM66 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Syce3B5KM66 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Syce3B5KM66 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Syce3B5KM66 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC16.56■□□□□ 0.24
Syce3B5KM66 Gm12626-201ENSMUST00000117339 1983 ntBASIC16.56■□□□□ 0.24
Syce3B5KM66 Gm12623-201ENSMUST00000119849 1983 ntBASIC16.56■□□□□ 0.24
Syce3B5KM66 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Syce3B5KM66 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 47.4 ms