Protein–RNA interactions for Protein: A2AQ07

Tubb1, Tubulin beta-1 chain, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb1A2AQ07 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Tubb1A2AQ07 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Tubb1A2AQ07 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Tubb1A2AQ07 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Tubb1A2AQ07 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Tubb1A2AQ07 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC14.83□□□□□ -0.04
Tubb1A2AQ07 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Tubb1A2AQ07 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Tubb1A2AQ07 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Tubb1A2AQ07 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Tubb1A2AQ07 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Tubb1A2AQ07 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Tubb1A2AQ07 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC14.83□□□□□ -0.04
Tubb1A2AQ07 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Tubb1A2AQ07 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Tubb1A2AQ07 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
Tubb1A2AQ07 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC14.83□□□□□ -0.04
Tubb1A2AQ07 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Tubb1A2AQ07 AC166574.6-201ENSMUST00000227889 1806 ntBASIC14.82□□□□□ -0.04
Tubb1A2AQ07 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Tubb1A2AQ07 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC14.82□□□□□ -0.04
Tubb1A2AQ07 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Tubb1A2AQ07 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Tubb1A2AQ07 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC14.82□□□□□ -0.04
Tubb1A2AQ07 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Tubb1A2AQ07 Gm43056-201ENSMUST00000197865 2791 ntBASIC14.82□□□□□ -0.04
Tubb1A2AQ07 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Tubb1A2AQ07 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Tubb1A2AQ07 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Tubb1A2AQ07 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Tubb1A2AQ07 Gm12260-201ENSMUST00000122447 411 ntBASIC14.82□□□□□ -0.04
Tubb1A2AQ07 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Tubb1A2AQ07 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC14.82□□□□□ -0.04
Tubb1A2AQ07 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Tubb1A2AQ07 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC14.82□□□□□ -0.04
Tubb1A2AQ07 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Tubb1A2AQ07 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Tubb1A2AQ07 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Tubb1A2AQ07 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Tubb1A2AQ07 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Tubb1A2AQ07 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Tubb1A2AQ07 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC14.82□□□□□ -0.04
Tubb1A2AQ07 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC14.82□□□□□ -0.04
Tubb1A2AQ07 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Tubb1A2AQ07 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Tubb1A2AQ07 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Tubb1A2AQ07 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC14.82□□□□□ -0.04
Tubb1A2AQ07 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Tubb1A2AQ07 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Tubb1A2AQ07 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Tubb1A2AQ07 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Tubb1A2AQ07 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Tubb1A2AQ07 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Tubb1A2AQ07 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Tubb1A2AQ07 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Tubb1A2AQ07 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Tubb1A2AQ07 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Tubb1A2AQ07 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Tubb1A2AQ07 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC14.81□□□□□ -0.04
Tubb1A2AQ07 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Tubb1A2AQ07 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Tubb1A2AQ07 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC14.81□□□□□ -0.04
Tubb1A2AQ07 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Tubb1A2AQ07 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Tubb1A2AQ07 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC14.81□□□□□ -0.04
Tubb1A2AQ07 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Tubb1A2AQ07 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Tubb1A2AQ07 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Tubb1A2AQ07 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Tubb1A2AQ07 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Tubb1A2AQ07 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC14.81□□□□□ -0.04
Tubb1A2AQ07 Gm11779-201ENSMUST00000118541 368 ntBASIC14.81□□□□□ -0.04
Tubb1A2AQ07 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC14.81□□□□□ -0.04
Tubb1A2AQ07 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Tubb1A2AQ07 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Tubb1A2AQ07 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC14.81□□□□□ -0.04
Tubb1A2AQ07 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Tubb1A2AQ07 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Tubb1A2AQ07 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Tubb1A2AQ07 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Tubb1A2AQ07 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC14.81□□□□□ -0.04
Tubb1A2AQ07 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC14.81□□□□□ -0.04
Tubb1A2AQ07 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Tubb1A2AQ07 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Tubb1A2AQ07 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Tubb1A2AQ07 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Tubb1A2AQ07 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Tubb1A2AQ07 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC14.81□□□□□ -0.04
Tubb1A2AQ07 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC14.81□□□□□ -0.04
Tubb1A2AQ07 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Tubb1A2AQ07 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Tubb1A2AQ07 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Tubb1A2AQ07 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Tubb1A2AQ07 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Tubb1A2AQ07 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Tubb1A2AQ07 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Tubb1A2AQ07 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Tubb1A2AQ07 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Tubb1A2AQ07 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Tubb1A2AQ07 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms