Protein–RNA interactions for Protein: A0A075B6B9

Trav6d-5, T cell receptor alpha variable 6D-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-5A0A075B6B9 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC11.69□□□□□ -0.54
Trav6d-5A0A075B6B9 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Trav6d-5A0A075B6B9 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Trav6d-5A0A075B6B9 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Trav6d-5A0A075B6B9 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Trav6d-5A0A075B6B9 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC11.69□□□□□ -0.54
Trav6d-5A0A075B6B9 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav6d-5A0A075B6B9 AA414768-201ENSMUST00000121924 1257 ntBASIC11.69□□□□□ -0.54
Trav6d-5A0A075B6B9 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC11.69□□□□□ -0.54
Trav6d-5A0A075B6B9 Gm4691-201ENSMUST00000182339 1000 ntBASIC11.69□□□□□ -0.54
Trav6d-5A0A075B6B9 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav6d-5A0A075B6B9 Gm2451-201ENSMUST00000199447 999 ntBASIC11.69□□□□□ -0.54
Trav6d-5A0A075B6B9 Gm10290-201ENSMUST00000200451 999 ntBASIC11.69□□□□□ -0.54
Trav6d-5A0A075B6B9 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC11.69□□□□□ -0.54
Trav6d-5A0A075B6B9 Otx2os1-206ENSMUST00000228153 787 ntBASIC11.69□□□□□ -0.54
Trav6d-5A0A075B6B9 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav6d-5A0A075B6B9 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Trav6d-5A0A075B6B9 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Trav6d-5A0A075B6B9 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Trav6d-5A0A075B6B9 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC11.69□□□□□ -0.54
Trav6d-5A0A075B6B9 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav6d-5A0A075B6B9 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Trav6d-5A0A075B6B9 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav6d-5A0A075B6B9 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav6d-5A0A075B6B9 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav6d-5A0A075B6B9 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav6d-5A0A075B6B9 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Trav6d-5A0A075B6B9 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav6d-5A0A075B6B9 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC11.69□□□□□ -0.54
Trav6d-5A0A075B6B9 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav6d-5A0A075B6B9 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav6d-5A0A075B6B9 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav6d-5A0A075B6B9 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Trav6d-5A0A075B6B9 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Trav6d-5A0A075B6B9 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav6d-5A0A075B6B9 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trav6d-5A0A075B6B9 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav6d-5A0A075B6B9 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav6d-5A0A075B6B9 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Trav6d-5A0A075B6B9 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav6d-5A0A075B6B9 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav6d-5A0A075B6B9 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trav6d-5A0A075B6B9 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trav6d-5A0A075B6B9 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav6d-5A0A075B6B9 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav6d-5A0A075B6B9 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trav6d-5A0A075B6B9 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav6d-5A0A075B6B9 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav6d-5A0A075B6B9 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC11.68□□□□□ -0.54
Trav6d-5A0A075B6B9 Gm5639-201ENSMUST00000122305 2403 ntBASIC11.68□□□□□ -0.54
Trav6d-5A0A075B6B9 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav6d-5A0A075B6B9 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trav6d-5A0A075B6B9 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav6d-5A0A075B6B9 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC11.68□□□□□ -0.54
Trav6d-5A0A075B6B9 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav6d-5A0A075B6B9 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC11.68□□□□□ -0.54
Trav6d-5A0A075B6B9 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav6d-5A0A075B6B9 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC11.68□□□□□ -0.54
Trav6d-5A0A075B6B9 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trav6d-5A0A075B6B9 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC11.68□□□□□ -0.54
Trav6d-5A0A075B6B9 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC11.68□□□□□ -0.54
Trav6d-5A0A075B6B9 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav6d-5A0A075B6B9 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC11.68□□□□□ -0.54
Trav6d-5A0A075B6B9 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav6d-5A0A075B6B9 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trav6d-5A0A075B6B9 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trav6d-5A0A075B6B9 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav6d-5A0A075B6B9 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Trav6d-5A0A075B6B9 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trav6d-5A0A075B6B9 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC11.68□□□□□ -0.54
Trav6d-5A0A075B6B9 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC11.68□□□□□ -0.54
Trav6d-5A0A075B6B9 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Trav6d-5A0A075B6B9 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav6d-5A0A075B6B9 Gm6728-201ENSMUST00000178117 1065 ntBASIC11.68□□□□□ -0.54
Trav6d-5A0A075B6B9 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC11.68□□□□□ -0.54
Trav6d-5A0A075B6B9 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Trav6d-5A0A075B6B9 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Trav6d-5A0A075B6B9 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav6d-5A0A075B6B9 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Trav6d-5A0A075B6B9 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Trav6d-5A0A075B6B9 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav6d-5A0A075B6B9 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trav6d-5A0A075B6B9 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav6d-5A0A075B6B9 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Trav6d-5A0A075B6B9 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC11.68□□□□□ -0.54
Trav6d-5A0A075B6B9 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav6d-5A0A075B6B9 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav6d-5A0A075B6B9 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav6d-5A0A075B6B9 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav6d-5A0A075B6B9 Gm12500-202ENSMUST00000186471 2428 ntBASIC11.68□□□□□ -0.54
Trav6d-5A0A075B6B9 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC11.68□□□□□ -0.54
Trav6d-5A0A075B6B9 Gm15889-202ENSMUST00000212669 2443 ntBASIC11.68□□□□□ -0.54
Trav6d-5A0A075B6B9 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav6d-5A0A075B6B9 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Trav6d-5A0A075B6B9 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav6d-5A0A075B6B9 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav6d-5A0A075B6B9 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav6d-5A0A075B6B9 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav6d-5A0A075B6B9 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trav6d-5A0A075B6B9 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms