Protein–RNA interactions for Protein: Q9Z0H3

Smarcb1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcb1Q9Z0H3 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Smarcb1Q9Z0H3 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC15.03■□□□□ -0
Smarcb1Q9Z0H3 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Smarcb1Q9Z0H3 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Smarcb1Q9Z0H3 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Smarcb1Q9Z0H3 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Smarcb1Q9Z0H3 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Smarcb1Q9Z0H3 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Smarcb1Q9Z0H3 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Smarcb1Q9Z0H3 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
Smarcb1Q9Z0H3 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Smarcb1Q9Z0H3 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Smarcb1Q9Z0H3 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Smarcb1Q9Z0H3 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC15.02■□□□□ -0
Smarcb1Q9Z0H3 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Smarcb1Q9Z0H3 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC15.02■□□□□ -0
Smarcb1Q9Z0H3 Gm4875-201ENSMUST00000118257 786 ntBASIC15.02■□□□□ -0
Smarcb1Q9Z0H3 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Smarcb1Q9Z0H3 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
Smarcb1Q9Z0H3 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC15.02■□□□□ -0
Smarcb1Q9Z0H3 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC15.02■□□□□ -0
Smarcb1Q9Z0H3 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Smarcb1Q9Z0H3 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Smarcb1Q9Z0H3 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC15.02□□□□□ -0.01
Smarcb1Q9Z0H3 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC15.02□□□□□ -0.01
Smarcb1Q9Z0H3 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC15.02□□□□□ -0.01
Smarcb1Q9Z0H3 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Smarcb1Q9Z0H3 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
Smarcb1Q9Z0H3 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Smarcb1Q9Z0H3 Sybu-209ENSMUST00000228639 4113 ntBASIC15.02□□□□□ -0.01
Smarcb1Q9Z0H3 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Smarcb1Q9Z0H3 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Smarcb1Q9Z0H3 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Smarcb1Q9Z0H3 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Smarcb1Q9Z0H3 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Smarcb1Q9Z0H3 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC15.01□□□□□ -0.01
Smarcb1Q9Z0H3 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC15.01□□□□□ -0.01
Smarcb1Q9Z0H3 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Smarcb1Q9Z0H3 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Smarcb1Q9Z0H3 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC15.01□□□□□ -0.01
Smarcb1Q9Z0H3 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Smarcb1Q9Z0H3 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Smarcb1Q9Z0H3 Gm7488-201ENSMUST00000117148 684 ntBASIC15.01□□□□□ -0.01
Smarcb1Q9Z0H3 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Smarcb1Q9Z0H3 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Smarcb1Q9Z0H3 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Smarcb1Q9Z0H3 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC15.01□□□□□ -0.01
Smarcb1Q9Z0H3 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC15.01□□□□□ -0.01
Smarcb1Q9Z0H3 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Smarcb1Q9Z0H3 AC121598.1-201ENSMUST00000228224 1019 ntBASIC15.01□□□□□ -0.01
Smarcb1Q9Z0H3 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Smarcb1Q9Z0H3 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Smarcb1Q9Z0H3 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Smarcb1Q9Z0H3 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Smarcb1Q9Z0H3 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Smarcb1Q9Z0H3 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Smarcb1Q9Z0H3 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Smarcb1Q9Z0H3 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Smarcb1Q9Z0H3 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Smarcb1Q9Z0H3 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC15.01□□□□□ -0.01
Smarcb1Q9Z0H3 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Smarcb1Q9Z0H3 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Smarcb1Q9Z0H3 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Smarcb1Q9Z0H3 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC15.01□□□□□ -0.01
Smarcb1Q9Z0H3 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Smarcb1Q9Z0H3 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Smarcb1Q9Z0H3 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC15.01□□□□□ -0.01
Smarcb1Q9Z0H3 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Smarcb1Q9Z0H3 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Smarcb1Q9Z0H3 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Smarcb1Q9Z0H3 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Smarcb1Q9Z0H3 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC15□□□□□ -0.01
Smarcb1Q9Z0H3 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Smarcb1Q9Z0H3 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Smarcb1Q9Z0H3 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC15□□□□□ -0.01
Smarcb1Q9Z0H3 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC15□□□□□ -0.01
Smarcb1Q9Z0H3 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Smarcb1Q9Z0H3 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC15□□□□□ -0.01
Smarcb1Q9Z0H3 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC15□□□□□ -0.01
Smarcb1Q9Z0H3 Gm15957-201ENSMUST00000118893 974 ntBASIC15□□□□□ -0.01
Smarcb1Q9Z0H3 Gm15321-201ENSMUST00000121290 288 ntBASIC15□□□□□ -0.01
Smarcb1Q9Z0H3 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC15□□□□□ -0.01
Smarcb1Q9Z0H3 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC15□□□□□ -0.01
Smarcb1Q9Z0H3 Gm16215-201ENSMUST00000161990 637 ntBASIC15□□□□□ -0.01
Smarcb1Q9Z0H3 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC15□□□□□ -0.01
Smarcb1Q9Z0H3 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Smarcb1Q9Z0H3 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC15□□□□□ -0.01
Smarcb1Q9Z0H3 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC15□□□□□ -0.01
Smarcb1Q9Z0H3 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC15□□□□□ -0.01
Smarcb1Q9Z0H3 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC15□□□□□ -0.01
Smarcb1Q9Z0H3 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Smarcb1Q9Z0H3 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Smarcb1Q9Z0H3 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC15□□□□□ -0.01
Smarcb1Q9Z0H3 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Smarcb1Q9Z0H3 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Smarcb1Q9Z0H3 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC15□□□□□ -0.01
Smarcb1Q9Z0H3 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Smarcb1Q9Z0H3 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC15□□□□□ -0.01
Smarcb1Q9Z0H3 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Smarcb1Q9Z0H3 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 59.7 ms