Protein–RNA interactions for Protein: Q99N57

Raf1, RAF proto-oncogene serine/threonine-protein kinase, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raf1Q99N57 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Raf1Q99N57 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC13.06□□□□□ -0.32
Raf1Q99N57 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Raf1Q99N57 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Raf1Q99N57 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Raf1Q99N57 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Raf1Q99N57 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Raf1Q99N57 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Raf1Q99N57 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Raf1Q99N57 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Raf1Q99N57 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Raf1Q99N57 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Raf1Q99N57 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Raf1Q99N57 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Raf1Q99N57 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Raf1Q99N57 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Raf1Q99N57 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Raf1Q99N57 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Raf1Q99N57 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Raf1Q99N57 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC13.05□□□□□ -0.32
Raf1Q99N57 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC13.05□□□□□ -0.32
Raf1Q99N57 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC13.05□□□□□ -0.32
Raf1Q99N57 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Raf1Q99N57 Gm26513-201ENSMUST00000181802 2489 ntBASIC13.05□□□□□ -0.32
Raf1Q99N57 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Raf1Q99N57 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Raf1Q99N57 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Raf1Q99N57 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Raf1Q99N57 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC13.05□□□□□ -0.32
Raf1Q99N57 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Raf1Q99N57 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Raf1Q99N57 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Raf1Q99N57 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC13.05□□□□□ -0.32
Raf1Q99N57 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Raf1Q99N57 AC166574.6-201ENSMUST00000227889 1806 ntBASIC13.05□□□□□ -0.32
Raf1Q99N57 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Raf1Q99N57 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC13.05□□□□□ -0.32
Raf1Q99N57 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Raf1Q99N57 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC13.05□□□□□ -0.32
Raf1Q99N57 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Raf1Q99N57 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC13.05□□□□□ -0.32
Raf1Q99N57 Gm26308-201ENSMUST00000157768 69 ntBASIC13.05□□□□□ -0.32
Raf1Q99N57 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Raf1Q99N57 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC13.05□□□□□ -0.32
Raf1Q99N57 Gm27628-201ENSMUST00000184911 107 ntBASIC13.05□□□□□ -0.32
Raf1Q99N57 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Raf1Q99N57 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Raf1Q99N57 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Raf1Q99N57 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Raf1Q99N57 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC13.05□□□□□ -0.32
Raf1Q99N57 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC13.05□□□□□ -0.32
Raf1Q99N57 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Raf1Q99N57 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Raf1Q99N57 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Raf1Q99N57 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Raf1Q99N57 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Raf1Q99N57 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Raf1Q99N57 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Raf1Q99N57 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Raf1Q99N57 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Raf1Q99N57 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Raf1Q99N57 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Raf1Q99N57 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Raf1Q99N57 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Raf1Q99N57 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Raf1Q99N57 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Raf1Q99N57 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Raf1Q99N57 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Raf1Q99N57 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC13.04□□□□□ -0.32
Raf1Q99N57 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Raf1Q99N57 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Raf1Q99N57 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Raf1Q99N57 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC13.04□□□□□ -0.32
Raf1Q99N57 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Raf1Q99N57 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC13.04□□□□□ -0.32
Raf1Q99N57 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC13.04□□□□□ -0.32
Raf1Q99N57 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Raf1Q99N57 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Raf1Q99N57 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC13.04□□□□□ -0.32
Raf1Q99N57 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC13.04□□□□□ -0.32
Raf1Q99N57 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Raf1Q99N57 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC13.04□□□□□ -0.32
Raf1Q99N57 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Raf1Q99N57 Ndufaf2-202ENSMUST00000223734 556 ntBASIC13.04□□□□□ -0.32
Raf1Q99N57 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Raf1Q99N57 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Raf1Q99N57 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Raf1Q99N57 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC13.04□□□□□ -0.32
Raf1Q99N57 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Raf1Q99N57 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Raf1Q99N57 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Raf1Q99N57 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Raf1Q99N57 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Raf1Q99N57 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Raf1Q99N57 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Raf1Q99N57 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Raf1Q99N57 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Raf1Q99N57 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC13.04□□□□□ -0.32
Raf1Q99N57 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Raf1Q99N57 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms