Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC12.74□□□□□ -0.37
Scrt1Q99M85 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Scrt1Q99M85 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Scrt1Q99M85 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC12.74□□□□□ -0.37
Scrt1Q99M85 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Scrt1Q99M85 Gm15321-201ENSMUST00000121290 288 ntBASIC12.74□□□□□ -0.37
Scrt1Q99M85 Gm12138-201ENSMUST00000122180 951 ntBASIC12.74□□□□□ -0.37
Scrt1Q99M85 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC12.74□□□□□ -0.37
Scrt1Q99M85 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC12.74□□□□□ -0.37
Scrt1Q99M85 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Scrt1Q99M85 Gm27920-201ENSMUST00000183953 96 ntBASIC12.74□□□□□ -0.37
Scrt1Q99M85 Gm27838-201ENSMUST00000184829 128 ntBASIC12.74□□□□□ -0.37
Scrt1Q99M85 Ighv8-7-201ENSMUST00000194349 297 ntBASIC12.74□□□□□ -0.37
Scrt1Q99M85 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC12.74□□□□□ -0.37
Scrt1Q99M85 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Scrt1Q99M85 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Scrt1Q99M85 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Scrt1Q99M85 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Scrt1Q99M85 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Scrt1Q99M85 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Scrt1Q99M85 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Scrt1Q99M85 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Scrt1Q99M85 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Scrt1Q99M85 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Scrt1Q99M85 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Scrt1Q99M85 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Scrt1Q99M85 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Scrt1Q99M85 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Scrt1Q99M85 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC12.73□□□□□ -0.37
Scrt1Q99M85 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Scrt1Q99M85 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Scrt1Q99M85 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Scrt1Q99M85 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Scrt1Q99M85 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Scrt1Q99M85 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Scrt1Q99M85 Gm37019-201ENSMUST00000192133 2134 ntBASIC12.73□□□□□ -0.37
Scrt1Q99M85 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Scrt1Q99M85 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Scrt1Q99M85 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
Scrt1Q99M85 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Scrt1Q99M85 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Scrt1Q99M85 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Scrt1Q99M85 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Scrt1Q99M85 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Scrt1Q99M85 Gm6539-201ENSMUST00000119157 1064 ntBASIC12.73□□□□□ -0.37
Scrt1Q99M85 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Scrt1Q99M85 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Scrt1Q99M85 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC12.73□□□□□ -0.37
Scrt1Q99M85 Gm27533-201ENSMUST00000183800 152 ntBASIC12.73□□□□□ -0.37
Scrt1Q99M85 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Scrt1Q99M85 Klk2-ps-201ENSMUST00000205342 571 ntBASIC12.73□□□□□ -0.37
Scrt1Q99M85 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Scrt1Q99M85 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC12.73□□□□□ -0.37
Scrt1Q99M85 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Scrt1Q99M85 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Scrt1Q99M85 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Scrt1Q99M85 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Scrt1Q99M85 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Scrt1Q99M85 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Scrt1Q99M85 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
Scrt1Q99M85 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Scrt1Q99M85 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC12.73□□□□□ -0.37
Scrt1Q99M85 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Scrt1Q99M85 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Scrt1Q99M85 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Scrt1Q99M85 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Scrt1Q99M85 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC12.72□□□□□ -0.37
Scrt1Q99M85 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Scrt1Q99M85 Gm29340-201ENSMUST00000188763 3854 ntBASIC12.72□□□□□ -0.37
Scrt1Q99M85 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Scrt1Q99M85 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Scrt1Q99M85 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Scrt1Q99M85 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Scrt1Q99M85 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC12.72□□□□□ -0.37
Scrt1Q99M85 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Scrt1Q99M85 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Scrt1Q99M85 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC12.72□□□□□ -0.37
Scrt1Q99M85 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC12.72□□□□□ -0.37
Scrt1Q99M85 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Scrt1Q99M85 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC12.72□□□□□ -0.37
Scrt1Q99M85 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Scrt1Q99M85 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Scrt1Q99M85 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Scrt1Q99M85 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Scrt1Q99M85 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Scrt1Q99M85 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Scrt1Q99M85 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Scrt1Q99M85 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Scrt1Q99M85 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Scrt1Q99M85 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Scrt1Q99M85 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC12.71□□□□□ -0.37
Scrt1Q99M85 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Scrt1Q99M85 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Scrt1Q99M85 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Scrt1Q99M85 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Scrt1Q99M85 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Scrt1Q99M85 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Scrt1Q99M85 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC12.71□□□□□ -0.37
Scrt1Q99M85 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Scrt1Q99M85 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms