Protein–RNA interactions for Protein: Q8CGV4

Rdh1, MCG140848, mousemouse

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rdh1Q8CGV4 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rdh1Q8CGV4 Gm5320-201ENSMUST00000207163 1519 ntBASIC14.1□□□□□ -0.15
Rdh1Q8CGV4 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rdh1Q8CGV4 Gm13127-201ENSMUST00000118978 1389 ntBASIC14.09□□□□□ -0.15
Rdh1Q8CGV4 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rdh1Q8CGV4 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rdh1Q8CGV4 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rdh1Q8CGV4 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Rdh1Q8CGV4 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rdh1Q8CGV4 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rdh1Q8CGV4 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rdh1Q8CGV4 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rdh1Q8CGV4 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rdh1Q8CGV4 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Rdh1Q8CGV4 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Rdh1Q8CGV4 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Rdh1Q8CGV4 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rdh1Q8CGV4 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rdh1Q8CGV4 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rdh1Q8CGV4 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rdh1Q8CGV4 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Rdh1Q8CGV4 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC14.09□□□□□ -0.15
Rdh1Q8CGV4 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rdh1Q8CGV4 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Rdh1Q8CGV4 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Rdh1Q8CGV4 Gm27437-201ENSMUST00000183429 107 ntBASIC14.09□□□□□ -0.15
Rdh1Q8CGV4 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rdh1Q8CGV4 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC14.09□□□□□ -0.15
Rdh1Q8CGV4 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rdh1Q8CGV4 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rdh1Q8CGV4 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rdh1Q8CGV4 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rdh1Q8CGV4 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rdh1Q8CGV4 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rdh1Q8CGV4 Camk2g-217ENSMUST00000226630 1937 ntBASIC14.09□□□□□ -0.15
Rdh1Q8CGV4 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Rdh1Q8CGV4 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rdh1Q8CGV4 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Rdh1Q8CGV4 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rdh1Q8CGV4 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rdh1Q8CGV4 Gm45212-201ENSMUST00000205831 3403 ntBASIC14.09□□□□□ -0.15
Rdh1Q8CGV4 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rdh1Q8CGV4 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rdh1Q8CGV4 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Rdh1Q8CGV4 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rdh1Q8CGV4 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.15
Rdh1Q8CGV4 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Rdh1Q8CGV4 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Rdh1Q8CGV4 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Rdh1Q8CGV4 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Rdh1Q8CGV4 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC14.08□□□□□ -0.15
Rdh1Q8CGV4 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.15
Rdh1Q8CGV4 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC14.08□□□□□ -0.16
Rdh1Q8CGV4 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rdh1Q8CGV4 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rdh1Q8CGV4 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Rdh1Q8CGV4 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rdh1Q8CGV4 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rdh1Q8CGV4 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC14.08□□□□□ -0.16
Rdh1Q8CGV4 Gm10584-201ENSMUST00000207036 2628 ntBASIC14.08□□□□□ -0.16
Rdh1Q8CGV4 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Rdh1Q8CGV4 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Rdh1Q8CGV4 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC14.08□□□□□ -0.16
Rdh1Q8CGV4 Gm15653-201ENSMUST00000119247 907 ntBASIC14.08□□□□□ -0.16
Rdh1Q8CGV4 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC14.08□□□□□ -0.16
Rdh1Q8CGV4 Gm15487-201ENSMUST00000122373 465 ntBASIC14.08□□□□□ -0.16
Rdh1Q8CGV4 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Rdh1Q8CGV4 CT025535.1-201ENSMUST00000227172 491 ntBASIC14.08□□□□□ -0.16
Rdh1Q8CGV4 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rdh1Q8CGV4 Mir125a-201ENSMUST00000083545 68 ntBASIC14.08□□□□□ -0.16
Rdh1Q8CGV4 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Rdh1Q8CGV4 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rdh1Q8CGV4 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rdh1Q8CGV4 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rdh1Q8CGV4 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Rdh1Q8CGV4 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rdh1Q8CGV4 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rdh1Q8CGV4 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rdh1Q8CGV4 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rdh1Q8CGV4 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rdh1Q8CGV4 Gm5357-201ENSMUST00000212720 1924 ntBASIC14.07□□□□□ -0.16
Rdh1Q8CGV4 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Rdh1Q8CGV4 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rdh1Q8CGV4 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rdh1Q8CGV4 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rdh1Q8CGV4 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rdh1Q8CGV4 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rdh1Q8CGV4 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rdh1Q8CGV4 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rdh1Q8CGV4 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rdh1Q8CGV4 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rdh1Q8CGV4 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rdh1Q8CGV4 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Rdh1Q8CGV4 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Rdh1Q8CGV4 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Rdh1Q8CGV4 Gm10275-202ENSMUST00000168697 495 ntBASIC14.07□□□□□ -0.16
Rdh1Q8CGV4 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rdh1Q8CGV4 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Rdh1Q8CGV4 AC123645.1-201ENSMUST00000228469 605 ntBASIC14.07□□□□□ -0.16
Rdh1Q8CGV4 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 49.5 ms