Protein–RNA interactions for Protein: P85442

Vgll3, Transcription cofactor vestigial-like protein 3, mousemouse

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vgll3P85442 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Vgll3P85442 Igsf9-201ENSMUST00000052629 4133 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Vgll3P85442 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Vgll3P85442 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Vgll3P85442 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Vgll3P85442 Ssr1-204ENSMUST00000225319 1610 ntBASIC14.92□□□□□ -0.02
Vgll3P85442 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Vgll3P85442 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Vgll3P85442 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Vgll3P85442 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Vgll3P85442 Slc25a36-202ENSMUST00000085206 5227 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Vgll3P85442 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Vgll3P85442 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Vgll3P85442 Mbd1-202ENSMUST00000224047 2838 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Vgll3P85442 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Vgll3P85442 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Vgll3P85442 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Vgll3P85442 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Vgll3P85442 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Vgll3P85442 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
Vgll3P85442 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Vgll3P85442 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Vgll3P85442 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC14.91□□□□□ -0.02
Vgll3P85442 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Vgll3P85442 Alkbh1-212ENSMUST00000185301 408 ntBASIC14.91□□□□□ -0.02
Vgll3P85442 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC14.91□□□□□ -0.02
Vgll3P85442 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Vgll3P85442 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Vgll3P85442 Zfp783-201ENSMUST00000095946 670 ntBASIC14.91□□□□□ -0.02
Vgll3P85442 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Vgll3P85442 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Vgll3P85442 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Vgll3P85442 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Vgll3P85442 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Vgll3P85442 Hoxa1-201ENSMUST00000000964 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Vgll3P85442 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Vgll3P85442 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Vgll3P85442 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Vgll3P85442 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Vgll3P85442 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Vgll3P85442 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC14.91□□□□□ -0.02
Vgll3P85442 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Vgll3P85442 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Vgll3P85442 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Vgll3P85442 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Vgll3P85442 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Vgll3P85442 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Vgll3P85442 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Vgll3P85442 Zfp125-201ENSMUST00000079237 2488 ntBASIC14.9□□□□□ -0.02
Vgll3P85442 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Vgll3P85442 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC14.9□□□□□ -0.02
Vgll3P85442 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Vgll3P85442 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Vgll3P85442 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Vgll3P85442 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Vgll3P85442 Ptgr2-207ENSMUST00000146377 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Vgll3P85442 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Vgll3P85442 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC14.9□□□□□ -0.02
Vgll3P85442 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Vgll3P85442 AC153881.1-201ENSMUST00000214448 284 ntBASIC14.9□□□□□ -0.02
Vgll3P85442 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Vgll3P85442 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Vgll3P85442 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Vgll3P85442 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Vgll3P85442 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC14.9□□□□□ -0.02
Vgll3P85442 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Vgll3P85442 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Vgll3P85442 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Vgll3P85442 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Vgll3P85442 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC14.9□□□□□ -0.02
Vgll3P85442 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Vgll3P85442 AC107453.4-201ENSMUST00000227068 1817 ntBASIC14.89□□□□□ -0.03
Vgll3P85442 Fosb-202ENSMUST00000207334 3664 ntTSL 5 BASIC14.89□□□□□ -0.03
Vgll3P85442 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Vgll3P85442 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC14.89□□□□□ -0.03
Vgll3P85442 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Vgll3P85442 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Vgll3P85442 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC14.89□□□□□ -0.03
Vgll3P85442 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Vgll3P85442 Gm43375-201ENSMUST00000196705 2480 ntBASIC14.89□□□□□ -0.03
Vgll3P85442 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Vgll3P85442 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Vgll3P85442 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Vgll3P85442 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Vgll3P85442 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Vgll3P85442 AC211878.3-201ENSMUST00000222629 2018 ntBASIC14.89□□□□□ -0.03
Vgll3P85442 Gm28719-201ENSMUST00000187779 1757 ntBASIC14.89□□□□□ -0.03
Vgll3P85442 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Vgll3P85442 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC14.89□□□□□ -0.03
Vgll3P85442 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Vgll3P85442 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC14.89□□□□□ -0.03
Vgll3P85442 Pabpc4-203ENSMUST00000106241 3050 ntAPPRIS P5 TSL 5 BASIC14.89□□□□□ -0.03
Vgll3P85442 Cc2d1a-201ENSMUST00000040383 3471 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Vgll3P85442 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Vgll3P85442 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Vgll3P85442 Anp32e-204ENSMUST00000168106 2890 ntTSL 5 BASIC14.89□□□□□ -0.03
Vgll3P85442 Pnkd-202ENSMUST00000087225 2859 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Vgll3P85442 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Vgll3P85442 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Vgll3P85442 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms