Protein–RNA interactions for Protein: P62892

Rpl39, 60S ribosomal protein L39, mousemouse

Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl39P62892 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
Rpl39P62892 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC10.36□□□□□ -0.75
Rpl39P62892 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC10.36□□□□□ -0.75
Rpl39P62892 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Rpl39P62892 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Rpl39P62892 AC164567.1-201ENSMUST00000219185 960 ntBASIC10.36□□□□□ -0.75
Rpl39P62892 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Rpl39P62892 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC10.36□□□□□ -0.75
Rpl39P62892 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC10.36□□□□□ -0.75
Rpl39P62892 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Rpl39P62892 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Rpl39P62892 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Rpl39P62892 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Rpl39P62892 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Rpl39P62892 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Rpl39P62892 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC10.36□□□□□ -0.75
Rpl39P62892 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
Rpl39P62892 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
Rpl39P62892 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Rpl39P62892 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Rpl39P62892 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
Rpl39P62892 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC10.36□□□□□ -0.75
Rpl39P62892 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Rpl39P62892 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
Rpl39P62892 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
Rpl39P62892 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Rpl39P62892 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Rpl39P62892 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Rpl39P62892 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
Rpl39P62892 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Rpl39P62892 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
Rpl39P62892 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Rpl39P62892 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Rpl39P62892 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Rpl39P62892 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
Rpl39P62892 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC10.35□□□□□ -0.75
Rpl39P62892 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC10.35□□□□□ -0.75
Rpl39P62892 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
Rpl39P62892 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Rpl39P62892 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
Rpl39P62892 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Rpl39P62892 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Rpl39P62892 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Rpl39P62892 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
Rpl39P62892 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC10.35□□□□□ -0.75
Rpl39P62892 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Rpl39P62892 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Rpl39P62892 Gm27742-201ENSMUST00000184667 60 ntBASIC10.35□□□□□ -0.75
Rpl39P62892 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC10.35□□□□□ -0.75
Rpl39P62892 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
Rpl39P62892 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Rpl39P62892 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
Rpl39P62892 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
Rpl39P62892 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
Rpl39P62892 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC10.35□□□□□ -0.75
Rpl39P62892 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Rpl39P62892 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Rpl39P62892 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Rpl39P62892 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Rpl39P62892 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Rpl39P62892 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Rpl39P62892 Gm42928-201ENSMUST00000197338 3339 ntBASIC10.35□□□□□ -0.75
Rpl39P62892 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC10.35□□□□□ -0.75
Rpl39P62892 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC10.35□□□□□ -0.75
Rpl39P62892 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Rpl39P62892 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Rpl39P62892 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
Rpl39P62892 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC10.35□□□□□ -0.75
Rpl39P62892 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Rpl39P62892 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Rpl39P62892 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Rpl39P62892 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Rpl39P62892 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Rpl39P62892 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Rpl39P62892 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Rpl39P62892 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
Rpl39P62892 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
Rpl39P62892 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Rpl39P62892 Gm37844-201ENSMUST00000192473 4097 ntBASIC10.34□□□□□ -0.75
Rpl39P62892 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC10.34□□□□□ -0.75
Rpl39P62892 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Rpl39P62892 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Rpl39P62892 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Rpl39P62892 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
Rpl39P62892 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Rpl39P62892 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC10.34□□□□□ -0.75
Rpl39P62892 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Rpl39P62892 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
Rpl39P62892 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Rpl39P62892 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Rpl39P62892 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Rpl39P62892 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Rpl39P62892 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC10.34□□□□□ -0.75
Rpl39P62892 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Rpl39P62892 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
Rpl39P62892 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Rpl39P62892 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Rpl39P62892 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Rpl39P62892 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Rpl39P62892 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms