Protein–RNA interactions for Protein: P42586

Nkx2-2, Homeobox protein Nkx-2.2, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-2P42586 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nkx2-2P42586 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nkx2-2P42586 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nkx2-2P42586 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nkx2-2P42586 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nkx2-2P42586 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nkx2-2P42586 Gm10676-201ENSMUST00000098778 3221 ntBASIC13.3□□□□□ -0.28
Nkx2-2P42586 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nkx2-2P42586 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nkx2-2P42586 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nkx2-2P42586 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Nkx2-2P42586 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC13.3□□□□□ -0.28
Nkx2-2P42586 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nkx2-2P42586 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Nkx2-2P42586 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nkx2-2P42586 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC13.3□□□□□ -0.28
Nkx2-2P42586 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Nkx2-2P42586 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nkx2-2P42586 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Nkx2-2P42586 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nkx2-2P42586 Gm14822-201ENSMUST00000122247 291 ntBASIC13.3□□□□□ -0.28
Nkx2-2P42586 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nkx2-2P42586 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nkx2-2P42586 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Nkx2-2P42586 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC13.3□□□□□ -0.28
Nkx2-2P42586 Mir6990-201ENSMUST00000183724 91 ntBASIC13.3□□□□□ -0.28
Nkx2-2P42586 Ighv8-7-201ENSMUST00000194349 297 ntBASIC13.3□□□□□ -0.28
Nkx2-2P42586 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Nkx2-2P42586 AC131710.1-201ENSMUST00000228336 990 ntBASIC13.3□□□□□ -0.28
Nkx2-2P42586 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nkx2-2P42586 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Nkx2-2P42586 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nkx2-2P42586 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nkx2-2P42586 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Nkx2-2P42586 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nkx2-2P42586 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Nkx2-2P42586 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nkx2-2P42586 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nkx2-2P42586 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nkx2-2P42586 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Nkx2-2P42586 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nkx2-2P42586 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC13.3□□□□□ -0.28
Nkx2-2P42586 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nkx2-2P42586 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Nkx2-2P42586 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Nkx2-2P42586 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nkx2-2P42586 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Nkx2-2P42586 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nkx2-2P42586 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Nkx2-2P42586 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Nkx2-2P42586 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Nkx2-2P42586 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
Nkx2-2P42586 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nkx2-2P42586 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nkx2-2P42586 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nkx2-2P42586 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nkx2-2P42586 Gm25287-201ENSMUST00000103846 110 ntBASIC13.29□□□□□ -0.28
Nkx2-2P42586 Gm22918-201ENSMUST00000103855 110 ntBASIC13.29□□□□□ -0.28
Nkx2-2P42586 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nkx2-2P42586 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC13.29□□□□□ -0.28
Nkx2-2P42586 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC13.29□□□□□ -0.28
Nkx2-2P42586 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC13.29□□□□□ -0.28
Nkx2-2P42586 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
Nkx2-2P42586 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nkx2-2P42586 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC13.29□□□□□ -0.28
Nkx2-2P42586 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC13.29□□□□□ -0.28
Nkx2-2P42586 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC13.29□□□□□ -0.28
Nkx2-2P42586 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC13.29□□□□□ -0.28
Nkx2-2P42586 AC102291.3-201ENSMUST00000226566 405 ntBASIC13.29□□□□□ -0.28
Nkx2-2P42586 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nkx2-2P42586 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nkx2-2P42586 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nkx2-2P42586 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Nkx2-2P42586 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nkx2-2P42586 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nkx2-2P42586 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nkx2-2P42586 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nkx2-2P42586 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC13.29□□□□□ -0.28
Nkx2-2P42586 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nkx2-2P42586 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
Nkx2-2P42586 CT025626.1-201ENSMUST00000223735 1455 ntBASIC13.29□□□□□ -0.28
Nkx2-2P42586 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nkx2-2P42586 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nkx2-2P42586 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nkx2-2P42586 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nkx2-2P42586 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Nkx2-2P42586 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nkx2-2P42586 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Nkx2-2P42586 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nkx2-2P42586 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nkx2-2P42586 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nkx2-2P42586 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Nkx2-2P42586 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Nkx2-2P42586 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nkx2-2P42586 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nkx2-2P42586 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nkx2-2P42586 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nkx2-2P42586 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC13.28□□□□□ -0.28
Nkx2-2P42586 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nkx2-2P42586 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 76.2 ms