Protein–RNA interactions for Protein: P10493

Nid1, Nidogen-1, mousemouse

Predictions only

Length 1,245 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nid1P10493 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nid1P10493 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Nid1P10493 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Nid1P10493 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nid1P10493 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nid1P10493 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Nid1P10493 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
Nid1P10493 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nid1P10493 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC13.6□□□□□ -0.23
Nid1P10493 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nid1P10493 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Nid1P10493 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC13.6□□□□□ -0.23
Nid1P10493 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC13.6□□□□□ -0.23
Nid1P10493 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nid1P10493 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Nid1P10493 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nid1P10493 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Nid1P10493 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nid1P10493 Gm10275-202ENSMUST00000168697 495 ntBASIC13.6□□□□□ -0.23
Nid1P10493 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nid1P10493 Mir8117-201ENSMUST00000184773 107 ntBASIC13.6□□□□□ -0.23
Nid1P10493 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nid1P10493 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC13.6□□□□□ -0.23
Nid1P10493 CT030684.1-201ENSMUST00000227292 914 ntBASIC13.6□□□□□ -0.23
Nid1P10493 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nid1P10493 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC13.6□□□□□ -0.23
Nid1P10493 Gm10275-201ENSMUST00000092620 635 ntBASIC13.6□□□□□ -0.23
Nid1P10493 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nid1P10493 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nid1P10493 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nid1P10493 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nid1P10493 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nid1P10493 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nid1P10493 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nid1P10493 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nid1P10493 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Nid1P10493 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nid1P10493 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nid1P10493 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Nid1P10493 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nid1P10493 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nid1P10493 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Nid1P10493 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nid1P10493 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Nid1P10493 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nid1P10493 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Nid1P10493 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC13.59□□□□□ -0.23
Nid1P10493 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nid1P10493 Gm15427-201ENSMUST00000117288 531 ntBASIC13.59□□□□□ -0.23
Nid1P10493 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC13.59□□□□□ -0.23
Nid1P10493 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC13.59□□□□□ -0.23
Nid1P10493 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Nid1P10493 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC13.59□□□□□ -0.23
Nid1P10493 Klk2-ps-201ENSMUST00000205342 571 ntBASIC13.59□□□□□ -0.23
Nid1P10493 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC13.59□□□□□ -0.23
Nid1P10493 Gm5364-201ENSMUST00000216789 889 ntBASIC13.59□□□□□ -0.23
Nid1P10493 AC102291.3-201ENSMUST00000226566 405 ntBASIC13.59□□□□□ -0.23
Nid1P10493 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC13.59□□□□□ -0.23
Nid1P10493 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nid1P10493 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nid1P10493 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nid1P10493 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nid1P10493 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC13.59□□□□□ -0.23
Nid1P10493 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nid1P10493 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Nid1P10493 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nid1P10493 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nid1P10493 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nid1P10493 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.23
Nid1P10493 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Nid1P10493 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Nid1P10493 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Nid1P10493 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
Nid1P10493 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Nid1P10493 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Nid1P10493 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Nid1P10493 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Nid1P10493 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Nid1P10493 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Nid1P10493 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Nid1P10493 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Nid1P10493 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC13.58□□□□□ -0.24
Nid1P10493 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Nid1P10493 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Nid1P10493 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC13.58□□□□□ -0.24
Nid1P10493 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC13.58□□□□□ -0.24
Nid1P10493 Gm27920-201ENSMUST00000183953 96 ntBASIC13.58□□□□□ -0.24
Nid1P10493 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC13.58□□□□□ -0.24
Nid1P10493 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC13.58□□□□□ -0.24
Nid1P10493 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Nid1P10493 AC174742.1-201ENSMUST00000218272 304 ntBASIC13.58□□□□□ -0.24
Nid1P10493 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Nid1P10493 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Nid1P10493 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Nid1P10493 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Nid1P10493 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Nid1P10493 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Nid1P10493 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Nid1P10493 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Nid1P10493 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms