Protein–RNA interactions for Protein: O35526

Stx1a, Syntaxin-1A, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stx1aO35526 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Stx1aO35526 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Stx1aO35526 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Stx1aO35526 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Stx1aO35526 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Stx1aO35526 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Stx1aO35526 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Stx1aO35526 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Stx1aO35526 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
Stx1aO35526 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Stx1aO35526 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Stx1aO35526 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Stx1aO35526 Gm37691-201ENSMUST00000192147 2573 ntBASIC16.33■□□□□ 0.21
Stx1aO35526 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Stx1aO35526 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Stx1aO35526 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Stx1aO35526 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
Stx1aO35526 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Stx1aO35526 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Stx1aO35526 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC16.33■□□□□ 0.21
Stx1aO35526 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Stx1aO35526 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Stx1aO35526 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Stx1aO35526 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC16.33■□□□□ 0.2
Stx1aO35526 Gm4691-201ENSMUST00000182339 1000 ntBASIC16.33■□□□□ 0.2
Stx1aO35526 Gm2451-201ENSMUST00000199447 999 ntBASIC16.33■□□□□ 0.2
Stx1aO35526 Gm10290-201ENSMUST00000200451 999 ntBASIC16.33■□□□□ 0.2
Stx1aO35526 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC16.33■□□□□ 0.2
Stx1aO35526 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Stx1aO35526 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC16.33■□□□□ 0.2
Stx1aO35526 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC16.33■□□□□ 0.2
Stx1aO35526 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Stx1aO35526 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Stx1aO35526 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Stx1aO35526 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Stx1aO35526 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Stx1aO35526 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Stx1aO35526 Tcf21-202ENSMUST00000218002 1788 ntBASIC16.33■□□□□ 0.2
Stx1aO35526 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Stx1aO35526 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Stx1aO35526 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Stx1aO35526 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Stx1aO35526 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Stx1aO35526 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Stx1aO35526 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Stx1aO35526 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Stx1aO35526 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Stx1aO35526 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Stx1aO35526 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Stx1aO35526 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Stx1aO35526 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Stx1aO35526 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Stx1aO35526 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Stx1aO35526 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Stx1aO35526 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC16.32■□□□□ 0.2
Stx1aO35526 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Stx1aO35526 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC16.32■□□□□ 0.2
Stx1aO35526 Gm42769-201ENSMUST00000198576 1659 ntBASIC16.32■□□□□ 0.2
Stx1aO35526 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC16.32■□□□□ 0.2
Stx1aO35526 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC16.32■□□□□ 0.2
Stx1aO35526 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Stx1aO35526 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Stx1aO35526 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Stx1aO35526 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Stx1aO35526 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Stx1aO35526 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC16.32■□□□□ 0.2
Stx1aO35526 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Stx1aO35526 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Stx1aO35526 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Stx1aO35526 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Stx1aO35526 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Stx1aO35526 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Stx1aO35526 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC16.31■□□□□ 0.2
Stx1aO35526 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Stx1aO35526 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC16.31■□□□□ 0.2
Stx1aO35526 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Stx1aO35526 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Stx1aO35526 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Stx1aO35526 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Stx1aO35526 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Stx1aO35526 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Stx1aO35526 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Stx1aO35526 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Stx1aO35526 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Stx1aO35526 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC16.31■□□□□ 0.2
Stx1aO35526 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC16.31■□□□□ 0.2
Stx1aO35526 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Stx1aO35526 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC16.31■□□□□ 0.2
Stx1aO35526 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC16.31■□□□□ 0.2
Stx1aO35526 Olfr286-202ENSMUST00000205305 969 ntBASIC16.31■□□□□ 0.2
Stx1aO35526 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
Stx1aO35526 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Stx1aO35526 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Stx1aO35526 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Stx1aO35526 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Stx1aO35526 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Stx1aO35526 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Stx1aO35526 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Stx1aO35526 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Stx1aO35526 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms