Protein–RNA interactions for Protein: F7BCN9

Gm28038, Predicted gene, 28038 (Fragment), mousemouse

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28038F7BCN9 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Gm28038F7BCN9 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Gm28038F7BCN9 CT030684.3-201ENSMUST00000227308 2445 ntBASIC10.83□□□□□ -0.68
Gm28038F7BCN9 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Gm28038F7BCN9 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Gm28038F7BCN9 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC10.82□□□□□ -0.68
Gm28038F7BCN9 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Gm28038F7BCN9 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Gm28038F7BCN9 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Gm28038F7BCN9 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC10.82□□□□□ -0.68
Gm28038F7BCN9 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC10.82□□□□□ -0.68
Gm28038F7BCN9 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC10.82□□□□□ -0.68
Gm28038F7BCN9 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Gm28038F7BCN9 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Gm28038F7BCN9 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Gm28038F7BCN9 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Gm28038F7BCN9 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Gm28038F7BCN9 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC10.82□□□□□ -0.68
Gm28038F7BCN9 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Gm28038F7BCN9 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC10.82□□□□□ -0.68
Gm28038F7BCN9 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Gm28038F7BCN9 Gm15165-201ENSMUST00000118140 502 ntBASIC10.82□□□□□ -0.68
Gm28038F7BCN9 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Gm28038F7BCN9 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Gm28038F7BCN9 Gm10499-201ENSMUST00000174094 934 ntBASIC10.82□□□□□ -0.68
Gm28038F7BCN9 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC10.82□□□□□ -0.68
Gm28038F7BCN9 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC10.82□□□□□ -0.68
Gm28038F7BCN9 B230112I24Rik-201ENSMUST00000203953 1229 ntBASIC10.82□□□□□ -0.68
Gm28038F7BCN9 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Gm28038F7BCN9 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Gm28038F7BCN9 Gm8655-201ENSMUST00000221159 852 ntBASIC10.82□□□□□ -0.68
Gm28038F7BCN9 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Gm28038F7BCN9 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Gm28038F7BCN9 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Gm28038F7BCN9 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Gm28038F7BCN9 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC10.82□□□□□ -0.68
Gm28038F7BCN9 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Gm28038F7BCN9 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Gm28038F7BCN9 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Gm28038F7BCN9 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Gm28038F7BCN9 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Gm28038F7BCN9 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Gm28038F7BCN9 Gm37691-201ENSMUST00000192147 2573 ntBASIC10.82□□□□□ -0.68
Gm28038F7BCN9 Gm19863-201ENSMUST00000192480 2218 ntBASIC10.82□□□□□ -0.68
Gm28038F7BCN9 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Gm28038F7BCN9 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Gm28038F7BCN9 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC10.82□□□□□ -0.68
Gm28038F7BCN9 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC10.82□□□□□ -0.68
Gm28038F7BCN9 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Gm28038F7BCN9 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Gm28038F7BCN9 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Gm28038F7BCN9 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Gm28038F7BCN9 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Gm28038F7BCN9 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC10.81□□□□□ -0.68
Gm28038F7BCN9 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Gm28038F7BCN9 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Gm28038F7BCN9 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Gm28038F7BCN9 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Gm28038F7BCN9 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Gm28038F7BCN9 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Gm28038F7BCN9 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Gm28038F7BCN9 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Gm28038F7BCN9 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Gm28038F7BCN9 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Gm28038F7BCN9 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Gm28038F7BCN9 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Gm28038F7BCN9 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Gm28038F7BCN9 Gm11453-201ENSMUST00000117318 1007 ntBASIC10.81□□□□□ -0.68
Gm28038F7BCN9 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC10.81□□□□□ -0.68
Gm28038F7BCN9 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Gm28038F7BCN9 Gm15968-201ENSMUST00000119342 1168 ntBASIC10.81□□□□□ -0.68
Gm28038F7BCN9 Gm7284-201ENSMUST00000131667 944 ntBASIC10.81□□□□□ -0.68
Gm28038F7BCN9 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC10.81□□□□□ -0.68
Gm28038F7BCN9 Gm27704-201ENSMUST00000185094 107 ntBASIC10.81□□□□□ -0.68
Gm28038F7BCN9 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC10.81□□□□□ -0.68
Gm28038F7BCN9 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Gm28038F7BCN9 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC10.81□□□□□ -0.68
Gm28038F7BCN9 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Gm28038F7BCN9 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Gm28038F7BCN9 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Gm28038F7BCN9 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Gm28038F7BCN9 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Gm28038F7BCN9 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Gm28038F7BCN9 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Gm28038F7BCN9 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC10.81□□□□□ -0.68
Gm28038F7BCN9 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Gm28038F7BCN9 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Gm28038F7BCN9 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Gm28038F7BCN9 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Gm28038F7BCN9 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC10.81□□□□□ -0.68
Gm28038F7BCN9 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC10.81□□□□□ -0.68
Gm28038F7BCN9 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Gm28038F7BCN9 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Gm28038F7BCN9 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Gm28038F7BCN9 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Gm28038F7BCN9 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Gm28038F7BCN9 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
Gm28038F7BCN9 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Gm28038F7BCN9 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Gm28038F7BCN9 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms