Protein–RNA interactions for Protein: D3Z4R4

Nkx6-2, NK6 homeobox 2, mousemouse

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-2D3Z4R4 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Nkx6-2D3Z4R4 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Nkx6-2D3Z4R4 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Nkx6-2D3Z4R4 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Nkx6-2D3Z4R4 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Nkx6-2D3Z4R4 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nkx6-2D3Z4R4 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nkx6-2D3Z4R4 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Nkx6-2D3Z4R4 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Nkx6-2D3Z4R4 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nkx6-2D3Z4R4 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nkx6-2D3Z4R4 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nkx6-2D3Z4R4 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nkx6-2D3Z4R4 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nkx6-2D3Z4R4 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nkx6-2D3Z4R4 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nkx6-2D3Z4R4 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nkx6-2D3Z4R4 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nkx6-2D3Z4R4 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Nkx6-2D3Z4R4 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Nkx6-2D3Z4R4 Trmt13-210ENSMUST00000198454 880 ntBASIC11.78□□□□□ -0.52
Nkx6-2D3Z4R4 Gm44878-201ENSMUST00000205812 1295 ntBASIC11.78□□□□□ -0.52
Nkx6-2D3Z4R4 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Nkx6-2D3Z4R4 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nkx6-2D3Z4R4 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nkx6-2D3Z4R4 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nkx6-2D3Z4R4 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC11.78□□□□□ -0.52
Nkx6-2D3Z4R4 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nkx6-2D3Z4R4 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Nkx6-2D3Z4R4 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nkx6-2D3Z4R4 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nkx6-2D3Z4R4 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Nkx6-2D3Z4R4 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC11.78□□□□□ -0.52
Nkx6-2D3Z4R4 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nkx6-2D3Z4R4 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nkx6-2D3Z4R4 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Nkx6-2D3Z4R4 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nkx6-2D3Z4R4 Gm8242-201ENSMUST00000193029 1420 ntBASIC11.77□□□□□ -0.52
Nkx6-2D3Z4R4 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Nkx6-2D3Z4R4 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Nkx6-2D3Z4R4 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC11.77□□□□□ -0.52
Nkx6-2D3Z4R4 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Nkx6-2D3Z4R4 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Nkx6-2D3Z4R4 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC11.77□□□□□ -0.52
Nkx6-2D3Z4R4 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.52
Nkx6-2D3Z4R4 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Nkx6-2D3Z4R4 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.52
Nkx6-2D3Z4R4 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Nkx6-2D3Z4R4 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Nkx6-2D3Z4R4 Gm15442-201ENSMUST00000117905 1527 ntBASIC11.77□□□□□ -0.52
Nkx6-2D3Z4R4 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Nkx6-2D3Z4R4 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Nkx6-2D3Z4R4 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Nkx6-2D3Z4R4 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Nkx6-2D3Z4R4 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Nkx6-2D3Z4R4 AC139054.1-201ENSMUST00000226898 1598 ntBASIC11.77□□□□□ -0.53
Nkx6-2D3Z4R4 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Nkx6-2D3Z4R4 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Nkx6-2D3Z4R4 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Nkx6-2D3Z4R4 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Nkx6-2D3Z4R4 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Nkx6-2D3Z4R4 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Nkx6-2D3Z4R4 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC11.77□□□□□ -0.53
Nkx6-2D3Z4R4 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC11.77□□□□□ -0.53
Nkx6-2D3Z4R4 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Nkx6-2D3Z4R4 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Nkx6-2D3Z4R4 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Nkx6-2D3Z4R4 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Nkx6-2D3Z4R4 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC11.77□□□□□ -0.53
Nkx6-2D3Z4R4 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Nkx6-2D3Z4R4 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Nkx6-2D3Z4R4 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Nkx6-2D3Z4R4 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Nkx6-2D3Z4R4 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Nkx6-2D3Z4R4 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Nkx6-2D3Z4R4 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Nkx6-2D3Z4R4 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Nkx6-2D3Z4R4 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Nkx6-2D3Z4R4 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Nkx6-2D3Z4R4 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Nkx6-2D3Z4R4 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Nkx6-2D3Z4R4 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Nkx6-2D3Z4R4 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Nkx6-2D3Z4R4 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Nkx6-2D3Z4R4 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Nkx6-2D3Z4R4 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Nkx6-2D3Z4R4 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Nkx6-2D3Z4R4 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Nkx6-2D3Z4R4 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC11.76□□□□□ -0.53
Nkx6-2D3Z4R4 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Nkx6-2D3Z4R4 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Nkx6-2D3Z4R4 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Nkx6-2D3Z4R4 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Nkx6-2D3Z4R4 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Nkx6-2D3Z4R4 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Nkx6-2D3Z4R4 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Nkx6-2D3Z4R4 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Nkx6-2D3Z4R4 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Nkx6-2D3Z4R4 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Nkx6-2D3Z4R4 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms