Protein–RNA interactions for Protein: A0A075B641

Trav8-1, T cell receptor alpha variable 8-1 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8-1A0A075B641 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav8-1A0A075B641 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC10.43□□□□□ -0.74
Trav8-1A0A075B641 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav8-1A0A075B641 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav8-1A0A075B641 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC10.43□□□□□ -0.74
Trav8-1A0A075B641 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC10.43□□□□□ -0.74
Trav8-1A0A075B641 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav8-1A0A075B641 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav8-1A0A075B641 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav8-1A0A075B641 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
Trav8-1A0A075B641 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav8-1A0A075B641 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav8-1A0A075B641 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Trav8-1A0A075B641 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Trav8-1A0A075B641 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC10.43□□□□□ -0.74
Trav8-1A0A075B641 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav8-1A0A075B641 Gm44981-201ENSMUST00000205549 1943 ntBASIC10.43□□□□□ -0.74
Trav8-1A0A075B641 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC10.43□□□□□ -0.74
Trav8-1A0A075B641 Gm42748-201ENSMUST00000199354 2341 ntBASIC10.42□□□□□ -0.74
Trav8-1A0A075B641 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav8-1A0A075B641 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav8-1A0A075B641 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav8-1A0A075B641 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav8-1A0A075B641 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC10.42□□□□□ -0.74
Trav8-1A0A075B641 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav8-1A0A075B641 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav8-1A0A075B641 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
Trav8-1A0A075B641 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
Trav8-1A0A075B641 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav8-1A0A075B641 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav8-1A0A075B641 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav8-1A0A075B641 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav8-1A0A075B641 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav8-1A0A075B641 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav8-1A0A075B641 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav8-1A0A075B641 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC10.42□□□□□ -0.74
Trav8-1A0A075B641 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav8-1A0A075B641 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav8-1A0A075B641 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav8-1A0A075B641 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC10.42□□□□□ -0.74
Trav8-1A0A075B641 Gm44430-201ENSMUST00000203376 995 ntBASIC10.42□□□□□ -0.74
Trav8-1A0A075B641 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav8-1A0A075B641 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav8-1A0A075B641 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav8-1A0A075B641 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC10.42□□□□□ -0.74
Trav8-1A0A075B641 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
Trav8-1A0A075B641 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav8-1A0A075B641 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Trav8-1A0A075B641 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC10.42□□□□□ -0.74
Trav8-1A0A075B641 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
Trav8-1A0A075B641 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav8-1A0A075B641 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav8-1A0A075B641 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav8-1A0A075B641 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Trav8-1A0A075B641 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Trav8-1A0A075B641 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav8-1A0A075B641 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
Trav8-1A0A075B641 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav8-1A0A075B641 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav8-1A0A075B641 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Trav8-1A0A075B641 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Trav8-1A0A075B641 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav8-1A0A075B641 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
Trav8-1A0A075B641 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav8-1A0A075B641 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
Trav8-1A0A075B641 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav8-1A0A075B641 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav8-1A0A075B641 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC10.41□□□□□ -0.74
Trav8-1A0A075B641 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav8-1A0A075B641 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC10.41□□□□□ -0.74
Trav8-1A0A075B641 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC10.41□□□□□ -0.74
Trav8-1A0A075B641 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav8-1A0A075B641 Gm27389-201ENSMUST00000183622 195 ntBASIC10.41□□□□□ -0.74
Trav8-1A0A075B641 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC10.41□□□□□ -0.74
Trav8-1A0A075B641 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC10.41□□□□□ -0.74
Trav8-1A0A075B641 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC10.41□□□□□ -0.74
Trav8-1A0A075B641 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC10.41□□□□□ -0.74
Trav8-1A0A075B641 CT009713.7-201ENSMUST00000224689 571 ntBASIC10.41□□□□□ -0.74
Trav8-1A0A075B641 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav8-1A0A075B641 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Trav8-1A0A075B641 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav8-1A0A075B641 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav8-1A0A075B641 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav8-1A0A075B641 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC10.41□□□□□ -0.74
Trav8-1A0A075B641 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav8-1A0A075B641 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Trav8-1A0A075B641 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC10.41□□□□□ -0.74
Trav8-1A0A075B641 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav8-1A0A075B641 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav8-1A0A075B641 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Trav8-1A0A075B641 Gm42769-201ENSMUST00000198576 1659 ntBASIC10.41□□□□□ -0.74
Trav8-1A0A075B641 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav8-1A0A075B641 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav8-1A0A075B641 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav8-1A0A075B641 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.74
Trav8-1A0A075B641 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trav8-1A0A075B641 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trav8-1A0A075B641 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trav8-1A0A075B641 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trav8-1A0A075B641 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms