Protein–RNA interactions for Protein: Q8VI40

Trim60, Tripartite motif-containing protein 60, mousemouse

Predictions only

Length 466 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim60Q8VI40 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC15.06■□□□□ 0
Trim60Q8VI40 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trim60Q8VI40 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC15.06■□□□□ 0
Trim60Q8VI40 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC15.06■□□□□ 0
Trim60Q8VI40 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC15.06■□□□□ 0
Trim60Q8VI40 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC15.06■□□□□ 0
Trim60Q8VI40 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC15.06■□□□□ 0
Trim60Q8VI40 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trim60Q8VI40 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trim60Q8VI40 Gm13036-201ENSMUST00000117799 748 ntBASIC15.06■□□□□ 0
Trim60Q8VI40 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Trim60Q8VI40 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC15.06■□□□□ 0
Trim60Q8VI40 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC15.06■□□□□ 0
Trim60Q8VI40 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC15.06■□□□□ 0
Trim60Q8VI40 AC161829.1-201ENSMUST00000220298 281 ntBASIC15.06■□□□□ 0
Trim60Q8VI40 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC15.06■□□□□ 0
Trim60Q8VI40 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trim60Q8VI40 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trim60Q8VI40 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
Trim60Q8VI40 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trim60Q8VI40 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC15.06■□□□□ 0
Trim60Q8VI40 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trim60Q8VI40 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC15.06■□□□□ 0
Trim60Q8VI40 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trim60Q8VI40 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trim60Q8VI40 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Trim60Q8VI40 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trim60Q8VI40 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trim60Q8VI40 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC15.06■□□□□ 0
Trim60Q8VI40 Gm4081-201ENSMUST00000195287 1838 ntBASIC15.06■□□□□ 0
Trim60Q8VI40 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
Trim60Q8VI40 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC15.05■□□□□ 0
Trim60Q8VI40 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Trim60Q8VI40 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Trim60Q8VI40 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ 0
Trim60Q8VI40 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ 0
Trim60Q8VI40 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC15.05■□□□□ 0
Trim60Q8VI40 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC15.05■□□□□ 0
Trim60Q8VI40 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trim60Q8VI40 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trim60Q8VI40 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC15.05■□□□□ -0
Trim60Q8VI40 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Trim60Q8VI40 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC15.05■□□□□ -0
Trim60Q8VI40 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC15.05■□□□□ -0
Trim60Q8VI40 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC15.05■□□□□ -0
Trim60Q8VI40 Mir8098-201ENSMUST00000184011 137 ntBASIC15.05■□□□□ -0
Trim60Q8VI40 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC15.05■□□□□ -0
Trim60Q8VI40 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trim60Q8VI40 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trim60Q8VI40 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trim60Q8VI40 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC15.05■□□□□ -0
Trim60Q8VI40 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trim60Q8VI40 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trim60Q8VI40 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Trim60Q8VI40 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
Trim60Q8VI40 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC15.05■□□□□ -0
Trim60Q8VI40 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC15.05■□□□□ -0
Trim60Q8VI40 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trim60Q8VI40 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC15.05■□□□□ -0
Trim60Q8VI40 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trim60Q8VI40 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trim60Q8VI40 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
Trim60Q8VI40 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Trim60Q8VI40 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
Trim60Q8VI40 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trim60Q8VI40 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trim60Q8VI40 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Trim60Q8VI40 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trim60Q8VI40 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Trim60Q8VI40 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trim60Q8VI40 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Trim60Q8VI40 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trim60Q8VI40 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC15.04■□□□□ -0
Trim60Q8VI40 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC15.04■□□□□ -0
Trim60Q8VI40 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trim60Q8VI40 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC15.04■□□□□ -0
Trim60Q8VI40 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Trim60Q8VI40 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC15.04■□□□□ -0
Trim60Q8VI40 Gm8597-201ENSMUST00000191525 1109 ntBASIC15.04■□□□□ -0
Trim60Q8VI40 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC15.04■□□□□ -0
Trim60Q8VI40 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trim60Q8VI40 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trim60Q8VI40 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC15.04■□□□□ -0
Trim60Q8VI40 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Trim60Q8VI40 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trim60Q8VI40 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trim60Q8VI40 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trim60Q8VI40 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trim60Q8VI40 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC15.04■□□□□ -0
Trim60Q8VI40 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trim60Q8VI40 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trim60Q8VI40 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trim60Q8VI40 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Trim60Q8VI40 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trim60Q8VI40 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trim60Q8VI40 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Trim60Q8VI40 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Trim60Q8VI40 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trim60Q8VI40 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Trim60Q8VI40 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms