Protein–RNA interactions for Protein: Q80T11

Ush1g, Usher syndrome type-1G protein homolog, mousemouse

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush1gQ80T11 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Ush1gQ80T11 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Ush1gQ80T11 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Ush1gQ80T11 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ush1gQ80T11 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ush1gQ80T11 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ush1gQ80T11 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ush1gQ80T11 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Ush1gQ80T11 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ush1gQ80T11 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC15.91■□□□□ 0.14
Ush1gQ80T11 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Ush1gQ80T11 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC15.91■□□□□ 0.14
Ush1gQ80T11 Efs-202ENSMUST00000227037 2540 ntBASIC15.91■□□□□ 0.14
Ush1gQ80T11 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ush1gQ80T11 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ush1gQ80T11 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC15.91■□□□□ 0.14
Ush1gQ80T11 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Ush1gQ80T11 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Ush1gQ80T11 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC15.91■□□□□ 0.14
Ush1gQ80T11 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ush1gQ80T11 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ush1gQ80T11 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
Ush1gQ80T11 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Ush1gQ80T11 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ush1gQ80T11 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ush1gQ80T11 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC15.91■□□□□ 0.14
Ush1gQ80T11 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ush1gQ80T11 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC15.91■□□□□ 0.14
Ush1gQ80T11 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ush1gQ80T11 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ush1gQ80T11 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ush1gQ80T11 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ush1gQ80T11 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ush1gQ80T11 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Ush1gQ80T11 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ush1gQ80T11 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ush1gQ80T11 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Ush1gQ80T11 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Ush1gQ80T11 Tcf21-202ENSMUST00000218002 1788 ntBASIC15.9■□□□□ 0.14
Ush1gQ80T11 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Ush1gQ80T11 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Ush1gQ80T11 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Ush1gQ80T11 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Ush1gQ80T11 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC15.9■□□□□ 0.14
Ush1gQ80T11 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC15.9■□□□□ 0.14
Ush1gQ80T11 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC15.9■□□□□ 0.14
Ush1gQ80T11 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Ush1gQ80T11 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Ush1gQ80T11 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Ush1gQ80T11 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Ush1gQ80T11 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Ush1gQ80T11 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Ush1gQ80T11 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Ush1gQ80T11 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Ush1gQ80T11 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC15.89■□□□□ 0.13
Ush1gQ80T11 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ush1gQ80T11 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ush1gQ80T11 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Ush1gQ80T11 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ush1gQ80T11 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ush1gQ80T11 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC15.89■□□□□ 0.13
Ush1gQ80T11 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ush1gQ80T11 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ush1gQ80T11 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ush1gQ80T11 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ush1gQ80T11 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ush1gQ80T11 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Ush1gQ80T11 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Ush1gQ80T11 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ush1gQ80T11 Gm24543-201ENSMUST00000103867 82 ntBASIC15.89■□□□□ 0.13
Ush1gQ80T11 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ush1gQ80T11 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Ush1gQ80T11 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Ush1gQ80T11 AC090659.2-201ENSMUST00000225378 1186 ntBASIC15.89■□□□□ 0.13
Ush1gQ80T11 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ush1gQ80T11 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ush1gQ80T11 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ush1gQ80T11 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
Ush1gQ80T11 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ush1gQ80T11 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ush1gQ80T11 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ush1gQ80T11 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Ush1gQ80T11 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ush1gQ80T11 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Ush1gQ80T11 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ush1gQ80T11 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Ush1gQ80T11 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ush1gQ80T11 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ush1gQ80T11 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Ush1gQ80T11 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Ush1gQ80T11 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ush1gQ80T11 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
Ush1gQ80T11 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Ush1gQ80T11 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Ush1gQ80T11 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ush1gQ80T11 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ush1gQ80T11 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ush1gQ80T11 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ush1gQ80T11 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ush1gQ80T11 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms