Protein–RNA interactions for Protein: Q6DFW4

Nop58, Nucleolar protein 58, mousemouse

Known RBP Predictions only

Length 536 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nop58Q6DFW4 Gm12497-201ENSMUST00000138778 237 ntBASIC20.07■□□□□ 0.8
Nop58Q6DFW4 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC20.07■□□□□ 0.8
Nop58Q6DFW4 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC20.07■□□□□ 0.8
Nop58Q6DFW4 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Nop58Q6DFW4 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC20.07■□□□□ 0.8
Nop58Q6DFW4 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Nop58Q6DFW4 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Nop58Q6DFW4 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Nop58Q6DFW4 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Nop58Q6DFW4 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Nop58Q6DFW4 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Nop58Q6DFW4 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Nop58Q6DFW4 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Nop58Q6DFW4 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Nop58Q6DFW4 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Nop58Q6DFW4 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC20.07■□□□□ 0.8
Nop58Q6DFW4 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Nop58Q6DFW4 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC20.06■□□□□ 0.8
Nop58Q6DFW4 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Nop58Q6DFW4 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Nop58Q6DFW4 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Nop58Q6DFW4 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Nop58Q6DFW4 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Nop58Q6DFW4 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
Nop58Q6DFW4 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Nop58Q6DFW4 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Nop58Q6DFW4 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC20.06■□□□□ 0.8
Nop58Q6DFW4 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Nop58Q6DFW4 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Nop58Q6DFW4 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Nop58Q6DFW4 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Nop58Q6DFW4 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Nop58Q6DFW4 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Nop58Q6DFW4 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Nop58Q6DFW4 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC20.05■□□□□ 0.8
Nop58Q6DFW4 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Nop58Q6DFW4 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Nop58Q6DFW4 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Nop58Q6DFW4 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Nop58Q6DFW4 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Nop58Q6DFW4 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Nop58Q6DFW4 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Nop58Q6DFW4 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Nop58Q6DFW4 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Nop58Q6DFW4 Gm11453-201ENSMUST00000117318 1007 ntBASIC20.05■□□□□ 0.8
Nop58Q6DFW4 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC20.05■□□□□ 0.8
Nop58Q6DFW4 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC20.05■□□□□ 0.8
Nop58Q6DFW4 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC20.05■□□□□ 0.8
Nop58Q6DFW4 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC20.05■□□□□ 0.8
Nop58Q6DFW4 Ighv6-1-201ENSMUST00000193612 343 ntBASIC20.05■□□□□ 0.8
Nop58Q6DFW4 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Nop58Q6DFW4 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Nop58Q6DFW4 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Nop58Q6DFW4 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Nop58Q6DFW4 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Nop58Q6DFW4 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Nop58Q6DFW4 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Nop58Q6DFW4 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Nop58Q6DFW4 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC20.05■□□□□ 0.8
Nop58Q6DFW4 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC20.04■□□□□ 0.8
Nop58Q6DFW4 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Nop58Q6DFW4 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Nop58Q6DFW4 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Nop58Q6DFW4 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Nop58Q6DFW4 AC122901.1-201ENSMUST00000214203 1790 ntBASIC20.04■□□□□ 0.8
Nop58Q6DFW4 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Nop58Q6DFW4 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Nop58Q6DFW4 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
Nop58Q6DFW4 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC20.04■□□□□ 0.8
Nop58Q6DFW4 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC20.04■□□□□ 0.8
Nop58Q6DFW4 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Nop58Q6DFW4 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Nop58Q6DFW4 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Nop58Q6DFW4 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Nop58Q6DFW4 Gm11405-201ENSMUST00000118689 1556 ntBASIC20.04■□□□□ 0.8
Nop58Q6DFW4 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Nop58Q6DFW4 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC20.03■□□□□ 0.8
Nop58Q6DFW4 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Nop58Q6DFW4 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Nop58Q6DFW4 Il17rd-203ENSMUST00000225146 3366 ntBASIC20.03■□□□□ 0.8
Nop58Q6DFW4 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Nop58Q6DFW4 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Nop58Q6DFW4 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Nop58Q6DFW4 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC20.03■□□□□ 0.8
Nop58Q6DFW4 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Nop58Q6DFW4 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Nop58Q6DFW4 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Nop58Q6DFW4 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Nop58Q6DFW4 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Nop58Q6DFW4 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC20.03■□□□□ 0.8
Nop58Q6DFW4 AC155729.1-201ENSMUST00000227758 544 ntBASIC20.03■□□□□ 0.8
Nop58Q6DFW4 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Nop58Q6DFW4 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Nop58Q6DFW4 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Nop58Q6DFW4 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Nop58Q6DFW4 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
Nop58Q6DFW4 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Nop58Q6DFW4 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC20.03■□□□□ 0.8
Nop58Q6DFW4 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Nop58Q6DFW4 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms