Protein–RNA interactions for Protein: Q63829

Commd3, COMM domain-containing protein 3, mousemouse

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Commd3Q63829 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Commd3Q63829 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Commd3Q63829 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Commd3Q63829 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC12.12□□□□□ -0.47
Commd3Q63829 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Commd3Q63829 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Commd3Q63829 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Commd3Q63829 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Commd3Q63829 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Commd3Q63829 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Commd3Q63829 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Commd3Q63829 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Commd3Q63829 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Commd3Q63829 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Commd3Q63829 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Commd3Q63829 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Commd3Q63829 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Commd3Q63829 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Commd3Q63829 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Commd3Q63829 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Commd3Q63829 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Commd3Q63829 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Commd3Q63829 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Commd3Q63829 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC12.11□□□□□ -0.47
Commd3Q63829 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Commd3Q63829 Gm8318-201ENSMUST00000182954 872 ntBASIC12.11□□□□□ -0.47
Commd3Q63829 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC12.11□□□□□ -0.47
Commd3Q63829 AC127349.1-201ENSMUST00000224590 266 ntBASIC12.11□□□□□ -0.47
Commd3Q63829 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Commd3Q63829 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Commd3Q63829 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Commd3Q63829 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC12.11□□□□□ -0.47
Commd3Q63829 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Commd3Q63829 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Commd3Q63829 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Commd3Q63829 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Commd3Q63829 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Commd3Q63829 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Commd3Q63829 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Commd3Q63829 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Commd3Q63829 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Commd3Q63829 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Commd3Q63829 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
Commd3Q63829 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Commd3Q63829 Ntrk2-208ENSMUST00000225583 2719 ntBASIC12.1□□□□□ -0.47
Commd3Q63829 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC12.1□□□□□ -0.47
Commd3Q63829 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC12.1□□□□□ -0.47
Commd3Q63829 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Commd3Q63829 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Commd3Q63829 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Commd3Q63829 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Commd3Q63829 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Commd3Q63829 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Commd3Q63829 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Commd3Q63829 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Commd3Q63829 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Commd3Q63829 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC12.1□□□□□ -0.47
Commd3Q63829 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Commd3Q63829 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Commd3Q63829 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Commd3Q63829 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Commd3Q63829 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Commd3Q63829 Gm13312-201ENSMUST00000119631 718 ntBASIC12.1□□□□□ -0.47
Commd3Q63829 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Commd3Q63829 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Commd3Q63829 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Commd3Q63829 Gm18622-201ENSMUST00000219361 595 ntBASIC12.1□□□□□ -0.47
Commd3Q63829 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC12.1□□□□□ -0.47
Commd3Q63829 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC12.1□□□□□ -0.47
Commd3Q63829 Vti1a-206ENSMUST00000225529 1244 ntBASIC12.1□□□□□ -0.47
Commd3Q63829 AC112142.1-201ENSMUST00000228796 918 ntBASIC12.1□□□□□ -0.47
Commd3Q63829 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Commd3Q63829 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Commd3Q63829 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Commd3Q63829 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Commd3Q63829 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Commd3Q63829 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Commd3Q63829 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Commd3Q63829 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Commd3Q63829 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC12.1□□□□□ -0.47
Commd3Q63829 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Commd3Q63829 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC12.1□□□□□ -0.47
Commd3Q63829 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Commd3Q63829 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Commd3Q63829 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Commd3Q63829 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Commd3Q63829 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Commd3Q63829 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Commd3Q63829 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Commd3Q63829 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC12.09□□□□□ -0.47
Commd3Q63829 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Commd3Q63829 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Commd3Q63829 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC12.09□□□□□ -0.47
Commd3Q63829 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Commd3Q63829 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Commd3Q63829 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Commd3Q63829 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Commd3Q63829 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Commd3Q63829 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Commd3Q63829 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms