Protein–RNA interactions for Protein: Q61982

Notch3, Neurogenic locus notch homolog protein 3, mousemouse

Predictions only

Length 2,318 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Notch3Q61982 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Notch3Q61982 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Notch3Q61982 Gm13453-201ENSMUST00000118708 357 ntBASIC11.21□□□□□ -0.61
Notch3Q61982 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
Notch3Q61982 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC11.21□□□□□ -0.61
Notch3Q61982 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC11.21□□□□□ -0.61
Notch3Q61982 Gm9794-201ENSMUST00000202370 423 ntBASIC11.21□□□□□ -0.61
Notch3Q61982 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Notch3Q61982 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Notch3Q61982 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Notch3Q61982 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Notch3Q61982 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC11.21□□□□□ -0.61
Notch3Q61982 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC11.21□□□□□ -0.61
Notch3Q61982 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Notch3Q61982 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
Notch3Q61982 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Notch3Q61982 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Notch3Q61982 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Notch3Q61982 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Notch3Q61982 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Notch3Q61982 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Notch3Q61982 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Notch3Q61982 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Notch3Q61982 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Notch3Q61982 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Notch3Q61982 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Notch3Q61982 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Notch3Q61982 Gm15487-201ENSMUST00000122373 465 ntBASIC11.21□□□□□ -0.62
Notch3Q61982 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Notch3Q61982 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Notch3Q61982 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Notch3Q61982 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.62
Notch3Q61982 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Notch3Q61982 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC11.21□□□□□ -0.62
Notch3Q61982 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC11.21□□□□□ -0.62
Notch3Q61982 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC11.21□□□□□ -0.62
Notch3Q61982 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Notch3Q61982 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Notch3Q61982 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Notch3Q61982 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Notch3Q61982 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Notch3Q61982 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Notch3Q61982 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.62
Notch3Q61982 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Notch3Q61982 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Notch3Q61982 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Notch3Q61982 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC11.2□□□□□ -0.62
Notch3Q61982 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Notch3Q61982 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Notch3Q61982 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Notch3Q61982 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC11.2□□□□□ -0.62
Notch3Q61982 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Notch3Q61982 Gm27680-201ENSMUST00000184192 160 ntBASIC11.2□□□□□ -0.62
Notch3Q61982 AC132863.2-201ENSMUST00000226643 799 ntBASIC11.2□□□□□ -0.62
Notch3Q61982 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Notch3Q61982 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Notch3Q61982 Gm42473-201ENSMUST00000201056 2291 ntBASIC11.2□□□□□ -0.62
Notch3Q61982 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Notch3Q61982 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Notch3Q61982 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Notch3Q61982 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Notch3Q61982 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Notch3Q61982 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Notch3Q61982 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
Notch3Q61982 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Notch3Q61982 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Notch3Q61982 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Notch3Q61982 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Notch3Q61982 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Notch3Q61982 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Notch3Q61982 Gm6415-201ENSMUST00000118488 348 ntBASIC11.2□□□□□ -0.62
Notch3Q61982 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Notch3Q61982 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Notch3Q61982 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Notch3Q61982 Gm28630-201ENSMUST00000187806 498 ntBASIC11.2□□□□□ -0.62
Notch3Q61982 Gm28631-201ENSMUST00000190740 334 ntBASIC11.2□□□□□ -0.62
Notch3Q61982 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Notch3Q61982 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC11.2□□□□□ -0.62
Notch3Q61982 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC11.2□□□□□ -0.62
Notch3Q61982 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Notch3Q61982 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Notch3Q61982 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Notch3Q61982 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Notch3Q61982 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Notch3Q61982 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Notch3Q61982 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Notch3Q61982 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Notch3Q61982 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Notch3Q61982 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Notch3Q61982 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Notch3Q61982 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Notch3Q61982 Gm8096-201ENSMUST00000209921 1591 ntBASIC11.2□□□□□ -0.62
Notch3Q61982 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Notch3Q61982 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Notch3Q61982 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC11.19□□□□□ -0.62
Notch3Q61982 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Notch3Q61982 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Notch3Q61982 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Notch3Q61982 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Notch3Q61982 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC11.19□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms