Protein–RNA interactions for Protein: Q60596

Xrcc1, DNA repair protein XRCC1, mousemouse

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xrcc1Q60596 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Xrcc1Q60596 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Xrcc1Q60596 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Xrcc1Q60596 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Xrcc1Q60596 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Xrcc1Q60596 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Xrcc1Q60596 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Xrcc1Q60596 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Xrcc1Q60596 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Xrcc1Q60596 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Xrcc1Q60596 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Xrcc1Q60596 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC13.92□□□□□ -0.18
Xrcc1Q60596 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Xrcc1Q60596 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Xrcc1Q60596 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Xrcc1Q60596 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Xrcc1Q60596 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC13.91□□□□□ -0.18
Xrcc1Q60596 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Xrcc1Q60596 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC13.91□□□□□ -0.18
Xrcc1Q60596 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Xrcc1Q60596 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Xrcc1Q60596 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Xrcc1Q60596 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Xrcc1Q60596 Gm38042-201ENSMUST00000191614 5208 ntBASIC13.91□□□□□ -0.18
Xrcc1Q60596 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Xrcc1Q60596 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Xrcc1Q60596 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Xrcc1Q60596 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Xrcc1Q60596 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Xrcc1Q60596 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Xrcc1Q60596 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Xrcc1Q60596 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Xrcc1Q60596 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Xrcc1Q60596 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC13.91□□□□□ -0.18
Xrcc1Q60596 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC13.91□□□□□ -0.18
Xrcc1Q60596 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Xrcc1Q60596 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC13.91□□□□□ -0.18
Xrcc1Q60596 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC13.91□□□□□ -0.18
Xrcc1Q60596 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Xrcc1Q60596 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Xrcc1Q60596 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Xrcc1Q60596 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Xrcc1Q60596 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Xrcc1Q60596 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Xrcc1Q60596 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Xrcc1Q60596 Carlr-201ENSMUST00000181515 2574 ntBASIC13.91□□□□□ -0.18
Xrcc1Q60596 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Xrcc1Q60596 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Xrcc1Q60596 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Xrcc1Q60596 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC13.91□□□□□ -0.18
Xrcc1Q60596 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Xrcc1Q60596 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Xrcc1Q60596 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Xrcc1Q60596 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Xrcc1Q60596 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Xrcc1Q60596 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Xrcc1Q60596 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
Xrcc1Q60596 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Xrcc1Q60596 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Xrcc1Q60596 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Xrcc1Q60596 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Xrcc1Q60596 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Xrcc1Q60596 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC13.9□□□□□ -0.18
Xrcc1Q60596 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Xrcc1Q60596 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Xrcc1Q60596 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Xrcc1Q60596 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Xrcc1Q60596 Mir449b-201ENSMUST00000104833 80 ntBASIC13.9□□□□□ -0.18
Xrcc1Q60596 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC13.9□□□□□ -0.18
Xrcc1Q60596 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC13.9□□□□□ -0.18
Xrcc1Q60596 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
Xrcc1Q60596 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC13.9□□□□□ -0.18
Xrcc1Q60596 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC13.9□□□□□ -0.18
Xrcc1Q60596 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC13.9□□□□□ -0.18
Xrcc1Q60596 AC158529.1-201ENSMUST00000223618 239 ntBASIC13.9□□□□□ -0.18
Xrcc1Q60596 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Xrcc1Q60596 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Xrcc1Q60596 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Xrcc1Q60596 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Xrcc1Q60596 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC13.9□□□□□ -0.18
Xrcc1Q60596 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Xrcc1Q60596 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Xrcc1Q60596 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Xrcc1Q60596 Gm6756-201ENSMUST00000180647 1620 ntBASIC13.9□□□□□ -0.19
Xrcc1Q60596 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC13.9□□□□□ -0.19
Xrcc1Q60596 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.19
Xrcc1Q60596 Gm42466-201ENSMUST00000202099 1301 ntBASIC13.9□□□□□ -0.19
Xrcc1Q60596 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Xrcc1Q60596 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Xrcc1Q60596 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Xrcc1Q60596 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Xrcc1Q60596 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Xrcc1Q60596 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Xrcc1Q60596 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Xrcc1Q60596 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Xrcc1Q60596 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Xrcc1Q60596 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Xrcc1Q60596 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Xrcc1Q60596 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Xrcc1Q60596 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 50.5 ms