Protein–RNA interactions for Protein: P97785

Gfra1, GDNF family receptor alpha-1, mousemouse

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gfra1P97785 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Gfra1P97785 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Gfra1P97785 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Gfra1P97785 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Gfra1P97785 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Gfra1P97785 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Gfra1P97785 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC12.03□□□□□ -0.48
Gfra1P97785 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
Gfra1P97785 Gm7336-201ENSMUST00000107041 1232 ntBASIC12.03□□□□□ -0.48
Gfra1P97785 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC12.03□□□□□ -0.48
Gfra1P97785 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
Gfra1P97785 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC12.03□□□□□ -0.48
Gfra1P97785 Gm8116-201ENSMUST00000182917 1201 ntBASIC12.03□□□□□ -0.48
Gfra1P97785 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Gfra1P97785 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
Gfra1P97785 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC12.03□□□□□ -0.48
Gfra1P97785 Gm5779-201ENSMUST00000218467 910 ntBASIC12.03□□□□□ -0.48
Gfra1P97785 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC12.03□□□□□ -0.48
Gfra1P97785 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Gfra1P97785 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Gfra1P97785 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Gfra1P97785 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Gfra1P97785 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Gfra1P97785 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC12.03□□□□□ -0.48
Gfra1P97785 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC12.03□□□□□ -0.48
Gfra1P97785 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC12.03□□□□□ -0.48
Gfra1P97785 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Gfra1P97785 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Gfra1P97785 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Gfra1P97785 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Gfra1P97785 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Gfra1P97785 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Gfra1P97785 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Gfra1P97785 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Gfra1P97785 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Gfra1P97785 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC12.03□□□□□ -0.48
Gfra1P97785 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Gfra1P97785 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Gfra1P97785 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Gfra1P97785 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Gfra1P97785 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Gfra1P97785 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Gfra1P97785 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Gfra1P97785 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Gfra1P97785 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC12.03□□□□□ -0.48
Gfra1P97785 Gm14780-201ENSMUST00000118387 2737 ntBASIC12.02□□□□□ -0.48
Gfra1P97785 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
Gfra1P97785 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Gfra1P97785 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Gfra1P97785 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Gfra1P97785 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Gfra1P97785 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Gfra1P97785 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Gfra1P97785 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.48
Gfra1P97785 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Gfra1P97785 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Gfra1P97785 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
Gfra1P97785 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Gfra1P97785 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Gfra1P97785 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Gfra1P97785 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Gfra1P97785 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC12.02□□□□□ -0.49
Gfra1P97785 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Gfra1P97785 Trav13-3-201ENSMUST00000117226 336 ntBASIC12.02□□□□□ -0.49
Gfra1P97785 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC12.02□□□□□ -0.49
Gfra1P97785 Gm15693-201ENSMUST00000120470 637 ntBASIC12.02□□□□□ -0.49
Gfra1P97785 Gm5479-201ENSMUST00000160578 435 ntBASIC12.02□□□□□ -0.49
Gfra1P97785 Ighv8-7-201ENSMUST00000194349 297 ntBASIC12.02□□□□□ -0.49
Gfra1P97785 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Gfra1P97785 Gm45098-201ENSMUST00000207179 657 ntBASIC12.02□□□□□ -0.49
Gfra1P97785 Gm9182-201ENSMUST00000217829 639 ntBASIC12.02□□□□□ -0.49
Gfra1P97785 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Gfra1P97785 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Gfra1P97785 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Gfra1P97785 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC12.02□□□□□ -0.49
Gfra1P97785 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Gfra1P97785 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC12.02□□□□□ -0.49
Gfra1P97785 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC12.02□□□□□ -0.49
Gfra1P97785 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC12.02□□□□□ -0.49
Gfra1P97785 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Gfra1P97785 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Gfra1P97785 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Gfra1P97785 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Gfra1P97785 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Gfra1P97785 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Gfra1P97785 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Gfra1P97785 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Gfra1P97785 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Gfra1P97785 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Gfra1P97785 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Gfra1P97785 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC12.01□□□□□ -0.49
Gfra1P97785 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Gfra1P97785 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Gfra1P97785 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Gfra1P97785 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Gfra1P97785 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Gfra1P97785 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Gfra1P97785 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Gfra1P97785 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Gfra1P97785 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC12.01□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms