Protein–RNA interactions for Protein: P62322

Lsm5, U6 snRNA-associated Sm-like protein LSm5, mousemouse

Predictions only

Length 91 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm5P62322 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC12.13□□□□□ -0.47
Lsm5P62322 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lsm5P62322 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lsm5P62322 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Lsm5P62322 Gm42928-201ENSMUST00000197338 3339 ntBASIC12.13□□□□□ -0.47
Lsm5P62322 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Lsm5P62322 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lsm5P62322 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lsm5P62322 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lsm5P62322 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lsm5P62322 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lsm5P62322 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Lsm5P62322 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lsm5P62322 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lsm5P62322 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lsm5P62322 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Lsm5P62322 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lsm5P62322 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Lsm5P62322 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Lsm5P62322 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC12.12□□□□□ -0.47
Lsm5P62322 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
Lsm5P62322 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Lsm5P62322 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Lsm5P62322 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Lsm5P62322 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Lsm5P62322 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC12.12□□□□□ -0.47
Lsm5P62322 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Lsm5P62322 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC12.12□□□□□ -0.47
Lsm5P62322 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Lsm5P62322 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Lsm5P62322 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC12.12□□□□□ -0.47
Lsm5P62322 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Lsm5P62322 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC12.12□□□□□ -0.47
Lsm5P62322 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Lsm5P62322 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Lsm5P62322 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Lsm5P62322 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Lsm5P62322 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Lsm5P62322 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Lsm5P62322 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Lsm5P62322 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Lsm5P62322 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Lsm5P62322 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Lsm5P62322 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Lsm5P62322 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC12.12□□□□□ -0.47
Lsm5P62322 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Lsm5P62322 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Lsm5P62322 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Lsm5P62322 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Lsm5P62322 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Lsm5P62322 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Lsm5P62322 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lsm5P62322 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC12.11□□□□□ -0.47
Lsm5P62322 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC12.11□□□□□ -0.47
Lsm5P62322 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Lsm5P62322 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lsm5P62322 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lsm5P62322 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lsm5P62322 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lsm5P62322 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lsm5P62322 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lsm5P62322 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lsm5P62322 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lsm5P62322 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lsm5P62322 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lsm5P62322 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lsm5P62322 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Lsm5P62322 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lsm5P62322 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lsm5P62322 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC12.11□□□□□ -0.47
Lsm5P62322 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lsm5P62322 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lsm5P62322 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lsm5P62322 Gm7901-201ENSMUST00000120430 1597 ntBASIC12.11□□□□□ -0.47
Lsm5P62322 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lsm5P62322 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lsm5P62322 AC153794.1-201ENSMUST00000169148 126 ntBASIC12.11□□□□□ -0.47
Lsm5P62322 Gm22240-201ENSMUST00000175225 82 ntBASIC12.11□□□□□ -0.47
Lsm5P62322 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lsm5P62322 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
Lsm5P62322 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC12.11□□□□□ -0.47
Lsm5P62322 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Lsm5P62322 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC12.11□□□□□ -0.47
Lsm5P62322 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lsm5P62322 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lsm5P62322 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Lsm5P62322 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Lsm5P62322 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lsm5P62322 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lsm5P62322 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lsm5P62322 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lsm5P62322 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lsm5P62322 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lsm5P62322 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lsm5P62322 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lsm5P62322 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lsm5P62322 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Lsm5P62322 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Lsm5P62322 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Lsm5P62322 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 43.7 ms