Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Gm45667-201ENSMUST00000210380 1316 ntBASIC14.77□□□□□ -0.04
Sox1P53783 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC14.77□□□□□ -0.04
Sox1P53783 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC14.77□□□□□ -0.04
Sox1P53783 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Sox1P53783 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Sox1P53783 Gm16177-201ENSMUST00000120728 718 ntBASIC14.77□□□□□ -0.05
Sox1P53783 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Sox1P53783 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Sox1P53783 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC14.77□□□□□ -0.05
Sox1P53783 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC14.77□□□□□ -0.05
Sox1P53783 Gm14235-201ENSMUST00000142445 366 ntTSL 3 BASIC14.77□□□□□ -0.05
Sox1P53783 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Sox1P53783 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC14.77□□□□□ -0.05
Sox1P53783 Gm2639-201ENSMUST00000156881 1297 ntBASIC14.77□□□□□ -0.05
Sox1P53783 Gm24644-201ENSMUST00000157114 139 ntBASIC14.77□□□□□ -0.05
Sox1P53783 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC14.77□□□□□ -0.05
Sox1P53783 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC14.77□□□□□ -0.05
Sox1P53783 Gm38341-201ENSMUST00000195357 515 ntBASIC14.77□□□□□ -0.05
Sox1P53783 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC14.77□□□□□ -0.05
Sox1P53783 Cts7-204ENSMUST00000225321 1257 ntBASIC14.77□□□□□ -0.05
Sox1P53783 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Sox1P53783 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Sox1P53783 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Sox1P53783 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Sox1P53783 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
Sox1P53783 Gm38327-201ENSMUST00000195852 1755 ntBASIC14.77□□□□□ -0.05
Sox1P53783 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
Sox1P53783 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC14.77□□□□□ -0.05
Sox1P53783 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Sox1P53783 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
Sox1P53783 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Sox1P53783 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Sox1P53783 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC14.77□□□□□ -0.05
Sox1P53783 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Sox1P53783 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC14.76□□□□□ -0.05
Sox1P53783 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Sox1P53783 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Sox1P53783 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Sox1P53783 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Sox1P53783 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Sox1P53783 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Sox1P53783 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Sox1P53783 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Sox1P53783 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Sox1P53783 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC14.76□□□□□ -0.05
Sox1P53783 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Sox1P53783 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Sox1P53783 Gm22018-201ENSMUST00000104357 131 ntBASIC14.76□□□□□ -0.05
Sox1P53783 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Sox1P53783 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC14.76□□□□□ -0.05
Sox1P53783 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC14.76□□□□□ -0.05
Sox1P53783 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC14.76□□□□□ -0.05
Sox1P53783 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC14.76□□□□□ -0.05
Sox1P53783 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC14.76□□□□□ -0.05
Sox1P53783 Gm24196-201ENSMUST00000179161 110 ntBASIC14.76□□□□□ -0.05
Sox1P53783 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC14.76□□□□□ -0.05
Sox1P53783 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC14.76□□□□□ -0.05
Sox1P53783 Gm43118-201ENSMUST00000199149 775 ntBASIC14.76□□□□□ -0.05
Sox1P53783 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Sox1P53783 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC14.76□□□□□ -0.05
Sox1P53783 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Sox1P53783 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Sox1P53783 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC14.76□□□□□ -0.05
Sox1P53783 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Sox1P53783 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Sox1P53783 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC14.76□□□□□ -0.05
Sox1P53783 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Sox1P53783 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC14.76□□□□□ -0.05
Sox1P53783 Tfap2a-203ENSMUST00000223869 2037 ntBASIC14.76□□□□□ -0.05
Sox1P53783 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Sox1P53783 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Sox1P53783 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Sox1P53783 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Sox1P53783 Sun1-203ENSMUST00000100517 1522 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Sox1P53783 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Sox1P53783 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Sox1P53783 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Sox1P53783 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Sox1P53783 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Sox1P53783 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Sox1P53783 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC14.75□□□□□ -0.05
Sox1P53783 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC14.75□□□□□ -0.05
Sox1P53783 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Sox1P53783 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Sox1P53783 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Sox1P53783 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Sox1P53783 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Sox1P53783 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Sox1P53783 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Sox1P53783 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Sox1P53783 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC14.75□□□□□ -0.05
Sox1P53783 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC14.75□□□□□ -0.05
Sox1P53783 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Sox1P53783 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC14.75□□□□□ -0.05
Sox1P53783 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC14.75□□□□□ -0.05
Sox1P53783 Gm45339-201ENSMUST00000210823 877 ntTSL 5 BASIC14.75□□□□□ -0.05
Sox1P53783 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Sox1P53783 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Sox1P53783 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Sox1P53783 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 57 ms