Protein–RNA interactions for Protein: P48437

Prox1, Prospero homeobox protein 1, mousemouse

Predictions only

Length 737 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prox1P48437 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Prox1P48437 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Prox1P48437 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC13.99□□□□□ -0.17
Prox1P48437 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Prox1P48437 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Prox1P48437 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC13.99□□□□□ -0.17
Prox1P48437 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Prox1P48437 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Prox1P48437 Gm7461-201ENSMUST00000058918 827 ntBASIC13.99□□□□□ -0.17
Prox1P48437 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Prox1P48437 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC13.99□□□□□ -0.17
Prox1P48437 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Prox1P48437 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Prox1P48437 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Prox1P48437 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Prox1P48437 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Prox1P48437 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Prox1P48437 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Prox1P48437 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Prox1P48437 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Prox1P48437 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Prox1P48437 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC13.99□□□□□ -0.17
Prox1P48437 Ankra2-208ENSMUST00000226100 1476 ntBASIC13.99□□□□□ -0.17
Prox1P48437 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Prox1P48437 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Prox1P48437 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Prox1P48437 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC13.98□□□□□ -0.17
Prox1P48437 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Prox1P48437 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC13.98□□□□□ -0.17
Prox1P48437 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Prox1P48437 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Prox1P48437 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Prox1P48437 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Prox1P48437 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Prox1P48437 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Prox1P48437 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Prox1P48437 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Prox1P48437 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC13.98□□□□□ -0.17
Prox1P48437 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Prox1P48437 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Prox1P48437 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Prox1P48437 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Prox1P48437 Gm11453-201ENSMUST00000117318 1007 ntBASIC13.98□□□□□ -0.17
Prox1P48437 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC13.98□□□□□ -0.17
Prox1P48437 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Prox1P48437 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Prox1P48437 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC13.98□□□□□ -0.17
Prox1P48437 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC13.98□□□□□ -0.17
Prox1P48437 Rbfox2-207ENSMUST00000227533 1041 ntBASIC13.98□□□□□ -0.17
Prox1P48437 Spr-ps1-201ENSMUST00000089584 605 ntBASIC13.98□□□□□ -0.17
Prox1P48437 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC13.98□□□□□ -0.17
Prox1P48437 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Prox1P48437 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Prox1P48437 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC13.98□□□□□ -0.17
Prox1P48437 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Prox1P48437 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Prox1P48437 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Prox1P48437 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Prox1P48437 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Prox1P48437 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Prox1P48437 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Prox1P48437 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Prox1P48437 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Prox1P48437 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC13.97□□□□□ -0.17
Prox1P48437 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC13.97□□□□□ -0.17
Prox1P48437 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Prox1P48437 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Prox1P48437 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Prox1P48437 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Prox1P48437 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Prox1P48437 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Prox1P48437 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Prox1P48437 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Prox1P48437 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Prox1P48437 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Prox1P48437 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Prox1P48437 Gm10499-201ENSMUST00000174094 934 ntBASIC13.97□□□□□ -0.17
Prox1P48437 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Prox1P48437 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Prox1P48437 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Prox1P48437 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Prox1P48437 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Prox1P48437 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Prox1P48437 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Prox1P48437 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Prox1P48437 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Prox1P48437 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Prox1P48437 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Prox1P48437 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Prox1P48437 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC13.97□□□□□ -0.17
Prox1P48437 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Prox1P48437 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Prox1P48437 Pcgf5-211ENSMUST00000225920 6443 ntBASIC13.97□□□□□ -0.17
Prox1P48437 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Prox1P48437 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Prox1P48437 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Prox1P48437 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Prox1P48437 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Prox1P48437 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Prox1P48437 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms