Protein–RNA interactions for Protein: P09405

Ncl, Nucleolin, mousemouse

Known RBP Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NclP09405 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
NclP09405 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
NclP09405 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
NclP09405 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
NclP09405 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
NclP09405 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC21.57■■□□□ 1.04
NclP09405 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
NclP09405 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
NclP09405 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
NclP09405 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
NclP09405 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC21.56■■□□□ 1.04
NclP09405 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC21.56■■□□□ 1.04
NclP09405 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
NclP09405 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
NclP09405 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
NclP09405 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
NclP09405 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC21.56■■□□□ 1.04
NclP09405 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
NclP09405 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC21.56■■□□□ 1.04
NclP09405 Gm27631-201ENSMUST00000184163 466 ntBASIC21.56■■□□□ 1.04
NclP09405 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
NclP09405 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
NclP09405 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
NclP09405 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
NclP09405 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
NclP09405 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
NclP09405 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
NclP09405 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
NclP09405 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
NclP09405 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
NclP09405 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
NclP09405 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
NclP09405 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
NclP09405 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
NclP09405 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
NclP09405 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
NclP09405 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
NclP09405 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
NclP09405 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
NclP09405 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
NclP09405 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
NclP09405 Mir1897-201ENSMUST00000122581 272 ntBASIC21.55■■□□□ 1.04
NclP09405 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC21.55■■□□□ 1.04
NclP09405 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
NclP09405 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
NclP09405 Gm5866-201ENSMUST00000177881 973 ntBASIC21.55■■□□□ 1.04
NclP09405 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
NclP09405 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
NclP09405 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
NclP09405 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
NclP09405 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC21.55■■□□□ 1.04
NclP09405 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
NclP09405 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
NclP09405 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
NclP09405 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
NclP09405 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
NclP09405 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
NclP09405 Gm45605-201ENSMUST00000210265 4269 ntBASIC21.55■■□□□ 1.04
NclP09405 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
NclP09405 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
NclP09405 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
NclP09405 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
NclP09405 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC21.54■■□□□ 1.04
NclP09405 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC21.54■■□□□ 1.04
NclP09405 Gm15653-201ENSMUST00000119247 907 ntBASIC21.54■■□□□ 1.04
NclP09405 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC21.54■■□□□ 1.04
NclP09405 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC21.54■■□□□ 1.04
NclP09405 Gm16476-201ENSMUST00000221544 139 ntBASIC21.54■■□□□ 1.04
NclP09405 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
NclP09405 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
NclP09405 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
NclP09405 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
NclP09405 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
NclP09405 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
NclP09405 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
NclP09405 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
NclP09405 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC21.53■■□□□ 1.04
NclP09405 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
NclP09405 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC21.53■■□□□ 1.04
NclP09405 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
NclP09405 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
NclP09405 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC21.53■■□□□ 1.04
NclP09405 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
NclP09405 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
NclP09405 Gm5320-201ENSMUST00000207163 1519 ntBASIC21.53■■□□□ 1.04
NclP09405 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
NclP09405 AC174678.1-201ENSMUST00000228007 2749 ntBASIC21.53■■□□□ 1.04
NclP09405 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
NclP09405 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
NclP09405 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
NclP09405 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
NclP09405 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC21.52■■□□□ 1.04
NclP09405 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
NclP09405 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
NclP09405 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
NclP09405 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
NclP09405 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
NclP09405 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
NclP09405 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
NclP09405 Gm15487-201ENSMUST00000122373 465 ntBASIC21.52■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 52 ms