Protein–RNA interactions for Protein: P06798

Hoxa4, Homeobox protein Hox-A4, mousemouse

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa4P06798 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Hoxa4P06798 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Hoxa4P06798 AC102291.3-201ENSMUST00000226566 405 ntBASIC14.3□□□□□ -0.12
Hoxa4P06798 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hoxa4P06798 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hoxa4P06798 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hoxa4P06798 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Hoxa4P06798 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hoxa4P06798 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hoxa4P06798 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hoxa4P06798 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hoxa4P06798 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Hoxa4P06798 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hoxa4P06798 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hoxa4P06798 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Hoxa4P06798 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hoxa4P06798 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
Hoxa4P06798 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hoxa4P06798 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Hoxa4P06798 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hoxa4P06798 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hoxa4P06798 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Hoxa4P06798 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Hoxa4P06798 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hoxa4P06798 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hoxa4P06798 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hoxa4P06798 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hoxa4P06798 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hoxa4P06798 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Hoxa4P06798 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC14.29□□□□□ -0.12
Hoxa4P06798 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hoxa4P06798 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Hoxa4P06798 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hoxa4P06798 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC14.29□□□□□ -0.12
Hoxa4P06798 Gm12134-201ENSMUST00000122109 520 ntBASIC14.29□□□□□ -0.12
Hoxa4P06798 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Hoxa4P06798 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hoxa4P06798 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC14.29□□□□□ -0.12
Hoxa4P06798 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC14.29□□□□□ -0.12
Hoxa4P06798 AC090659.2-201ENSMUST00000225378 1186 ntBASIC14.29□□□□□ -0.12
Hoxa4P06798 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
Hoxa4P06798 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hoxa4P06798 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Hoxa4P06798 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hoxa4P06798 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Hoxa4P06798 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hoxa4P06798 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hoxa4P06798 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hoxa4P06798 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Hoxa4P06798 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hoxa4P06798 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hoxa4P06798 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hoxa4P06798 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hoxa4P06798 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hoxa4P06798 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC14.29□□□□□ -0.12
Hoxa4P06798 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hoxa4P06798 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hoxa4P06798 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC14.28□□□□□ -0.12
Hoxa4P06798 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Hoxa4P06798 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC14.28□□□□□ -0.12
Hoxa4P06798 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC14.28□□□□□ -0.12
Hoxa4P06798 Mir6956-201ENSMUST00000183598 62 ntBASIC14.28□□□□□ -0.12
Hoxa4P06798 Gm27618-201ENSMUST00000183671 60 ntBASIC14.28□□□□□ -0.12
Hoxa4P06798 Gm27533-201ENSMUST00000183800 152 ntBASIC14.28□□□□□ -0.12
Hoxa4P06798 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Hoxa4P06798 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC14.28□□□□□ -0.12
Hoxa4P06798 Gm16476-201ENSMUST00000221544 139 ntBASIC14.28□□□□□ -0.12
Hoxa4P06798 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
Hoxa4P06798 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Hoxa4P06798 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Hoxa4P06798 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Hoxa4P06798 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC14.28□□□□□ -0.12
Hoxa4P06798 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Hoxa4P06798 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Hoxa4P06798 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Hoxa4P06798 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC14.28□□□□□ -0.12
Hoxa4P06798 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Hoxa4P06798 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Hoxa4P06798 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Hoxa4P06798 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Hoxa4P06798 Gm12620-201ENSMUST00000119791 1986 ntBASIC14.27□□□□□ -0.12
Hoxa4P06798 Gm12612-201ENSMUST00000140182 1986 ntBASIC14.27□□□□□ -0.12
Hoxa4P06798 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Hoxa4P06798 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Hoxa4P06798 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Hoxa4P06798 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Hoxa4P06798 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Hoxa4P06798 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Hoxa4P06798 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC14.27□□□□□ -0.12
Hoxa4P06798 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Hoxa4P06798 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Hoxa4P06798 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
Hoxa4P06798 Gm24543-201ENSMUST00000103867 82 ntBASIC14.27□□□□□ -0.13
Hoxa4P06798 Gm15653-201ENSMUST00000119247 907 ntBASIC14.27□□□□□ -0.13
Hoxa4P06798 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC14.27□□□□□ -0.13
Hoxa4P06798 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC14.27□□□□□ -0.13
Hoxa4P06798 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Hoxa4P06798 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC14.27□□□□□ -0.13
Hoxa4P06798 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Hoxa4P06798 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms