Protein–RNA interactions for Protein: P02463

Col4a1, Collagen alpha-1(IV) chain, mousemouse

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a1P02463 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Col4a1P02463 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Col4a1P02463 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Col4a1P02463 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Col4a1P02463 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Col4a1P02463 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC17.58■□□□□ 0.41
Col4a1P02463 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Col4a1P02463 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC17.58■□□□□ 0.41
Col4a1P02463 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Col4a1P02463 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC17.58■□□□□ 0.41
Col4a1P02463 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Col4a1P02463 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC17.58■□□□□ 0.41
Col4a1P02463 Gm37812-201ENSMUST00000195216 2475 ntBASIC17.58■□□□□ 0.41
Col4a1P02463 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Col4a1P02463 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Col4a1P02463 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Col4a1P02463 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Col4a1P02463 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Col4a1P02463 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Col4a1P02463 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Col4a1P02463 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Col4a1P02463 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Col4a1P02463 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Col4a1P02463 AC161252.3-201ENSMUST00000225465 1549 ntBASIC17.58■□□□□ 0.4
Col4a1P02463 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Col4a1P02463 Gm37728-201ENSMUST00000195025 2292 ntBASIC17.58■□□□□ 0.4
Col4a1P02463 Gm4984-201ENSMUST00000115987 360 ntBASIC17.58■□□□□ 0.4
Col4a1P02463 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC17.58■□□□□ 0.4
Col4a1P02463 Gm8835-201ENSMUST00000173096 1169 ntBASIC17.58■□□□□ 0.4
Col4a1P02463 Gm4804-201ENSMUST00000182234 999 ntBASIC17.58■□□□□ 0.4
Col4a1P02463 Mir6420-201ENSMUST00000185032 102 ntBASIC17.58■□□□□ 0.4
Col4a1P02463 AC122459.1-201ENSMUST00000228373 885 ntBASIC17.58■□□□□ 0.4
Col4a1P02463 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Col4a1P02463 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Col4a1P02463 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Col4a1P02463 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Col4a1P02463 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Col4a1P02463 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Col4a1P02463 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Col4a1P02463 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC17.57■□□□□ 0.4
Col4a1P02463 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC17.57■□□□□ 0.4
Col4a1P02463 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Col4a1P02463 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC17.57■□□□□ 0.4
Col4a1P02463 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Col4a1P02463 Gm8652-201ENSMUST00000181363 964 ntBASIC17.57■□□□□ 0.4
Col4a1P02463 Gm18905-201ENSMUST00000205454 928 ntBASIC17.57■□□□□ 0.4
Col4a1P02463 AC110817.1-201ENSMUST00000225706 605 ntBASIC17.57■□□□□ 0.4
Col4a1P02463 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Col4a1P02463 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Col4a1P02463 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Col4a1P02463 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Col4a1P02463 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC17.57■□□□□ 0.4
Col4a1P02463 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Col4a1P02463 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Col4a1P02463 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Col4a1P02463 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Col4a1P02463 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC17.57■□□□□ 0.4
Col4a1P02463 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Col4a1P02463 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Col4a1P02463 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Col4a1P02463 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Col4a1P02463 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Col4a1P02463 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Col4a1P02463 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Col4a1P02463 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Col4a1P02463 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Col4a1P02463 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC17.56■□□□□ 0.4
Col4a1P02463 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC17.56■□□□□ 0.4
Col4a1P02463 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC17.56■□□□□ 0.4
Col4a1P02463 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC17.56■□□□□ 0.4
Col4a1P02463 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Col4a1P02463 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Col4a1P02463 AC155258.1-201ENSMUST00000219303 253 ntBASIC17.56■□□□□ 0.4
Col4a1P02463 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Col4a1P02463 AC192088.1-201ENSMUST00000227561 301 ntBASIC17.56■□□□□ 0.4
Col4a1P02463 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Col4a1P02463 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Col4a1P02463 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Col4a1P02463 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Col4a1P02463 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Col4a1P02463 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Col4a1P02463 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Col4a1P02463 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Col4a1P02463 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Col4a1P02463 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Col4a1P02463 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Col4a1P02463 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Col4a1P02463 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Col4a1P02463 Gm12416-201ENSMUST00000120911 1008 ntBASIC17.55■□□□□ 0.4
Col4a1P02463 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC17.55■□□□□ 0.4
Col4a1P02463 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC17.55■□□□□ 0.4
Col4a1P02463 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Col4a1P02463 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Col4a1P02463 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC17.55■□□□□ 0.4
Col4a1P02463 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Col4a1P02463 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Col4a1P02463 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Col4a1P02463 Gm9109-201ENSMUST00000120254 1405 ntBASIC17.55■□□□□ 0.4
Col4a1P02463 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Col4a1P02463 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC17.55■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 45.3 ms