Protein–RNA interactions for Protein: O55203

Ldb2, LIM domain-binding protein 2, mousemouse

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb2O55203 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ldb2O55203 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Ldb2O55203 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ldb2O55203 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ldb2O55203 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC14.47□□□□□ -0.09
Ldb2O55203 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ldb2O55203 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ldb2O55203 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC14.47□□□□□ -0.09
Ldb2O55203 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ldb2O55203 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Ldb2O55203 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ldb2O55203 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Ldb2O55203 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Ldb2O55203 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ldb2O55203 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ldb2O55203 Nudt18-203ENSMUST00000228768 1578 ntBASIC14.47□□□□□ -0.09
Ldb2O55203 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC14.47□□□□□ -0.09
Ldb2O55203 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC14.47□□□□□ -0.09
Ldb2O55203 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Ldb2O55203 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ldb2O55203 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ldb2O55203 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC14.46□□□□□ -0.09
Ldb2O55203 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ldb2O55203 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ldb2O55203 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ldb2O55203 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC14.46□□□□□ -0.09
Ldb2O55203 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ldb2O55203 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ldb2O55203 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ldb2O55203 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ldb2O55203 Gm2810-201ENSMUST00000118681 990 ntBASIC14.46□□□□□ -0.09
Ldb2O55203 Gm13365-201ENSMUST00000121188 973 ntBASIC14.46□□□□□ -0.09
Ldb2O55203 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Ldb2O55203 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC14.46□□□□□ -0.09
Ldb2O55203 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Ldb2O55203 Rprl2-201ENSMUST00000157150 290 ntBASIC14.46□□□□□ -0.09
Ldb2O55203 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC14.46□□□□□ -0.09
Ldb2O55203 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC14.46□□□□□ -0.09
Ldb2O55203 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ldb2O55203 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ldb2O55203 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Ldb2O55203 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Ldb2O55203 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC14.46□□□□□ -0.09
Ldb2O55203 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ldb2O55203 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ldb2O55203 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ldb2O55203 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Ldb2O55203 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ldb2O55203 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Ldb2O55203 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.1
Ldb2O55203 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
Ldb2O55203 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Ldb2O55203 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ldb2O55203 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Ldb2O55203 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ldb2O55203 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ldb2O55203 Gm42934-201ENSMUST00000196920 1345 ntBASIC14.45□□□□□ -0.1
Ldb2O55203 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ldb2O55203 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ldb2O55203 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC14.45□□□□□ -0.1
Ldb2O55203 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ldb2O55203 Gm5648-201ENSMUST00000122244 1587 ntBASIC14.45□□□□□ -0.1
Ldb2O55203 Mir1895-201ENSMUST00000122615 79 ntBASIC14.45□□□□□ -0.1
Ldb2O55203 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Ldb2O55203 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Ldb2O55203 Gm18737-201ENSMUST00000173594 937 ntBASIC14.45□□□□□ -0.1
Ldb2O55203 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Ldb2O55203 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Ldb2O55203 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ldb2O55203 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Ldb2O55203 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Ldb2O55203 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Ldb2O55203 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Ldb2O55203 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ldb2O55203 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ldb2O55203 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ldb2O55203 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Ldb2O55203 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Ldb2O55203 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Ldb2O55203 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ldb2O55203 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ldb2O55203 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ldb2O55203 Gm43205-201ENSMUST00000198622 1968 ntBASIC14.44□□□□□ -0.1
Ldb2O55203 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ldb2O55203 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ldb2O55203 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ldb2O55203 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ldb2O55203 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ldb2O55203 Gm25925-201ENSMUST00000158314 306 ntBASIC14.44□□□□□ -0.1
Ldb2O55203 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC14.44□□□□□ -0.1
Ldb2O55203 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Ldb2O55203 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC14.44□□□□□ -0.1
Ldb2O55203 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC14.44□□□□□ -0.1
Ldb2O55203 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ldb2O55203 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ldb2O55203 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Ldb2O55203 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Ldb2O55203 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Ldb2O55203 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ldb2O55203 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms