Protein–RNA interactions for Protein: O35218

Cpsf2, Cleavage and polyadenylation specificity factor subunit 2, mousemouse

Known RBP Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf2O35218 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC15.58■□□□□ 0.09
Cpsf2O35218 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC15.58■□□□□ 0.09
Cpsf2O35218 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC15.58■□□□□ 0.09
Cpsf2O35218 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Cpsf2O35218 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Cpsf2O35218 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC15.58■□□□□ 0.08
Cpsf2O35218 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Cpsf2O35218 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC15.58■□□□□ 0.08
Cpsf2O35218 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Cpsf2O35218 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Cpsf2O35218 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Cpsf2O35218 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Cpsf2O35218 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
Cpsf2O35218 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC15.58■□□□□ 0.08
Cpsf2O35218 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC15.58■□□□□ 0.08
Cpsf2O35218 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Cpsf2O35218 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Cpsf2O35218 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
Cpsf2O35218 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Cpsf2O35218 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Cpsf2O35218 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC15.58■□□□□ 0.08
Cpsf2O35218 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
Cpsf2O35218 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Cpsf2O35218 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Cpsf2O35218 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Cpsf2O35218 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cpsf2O35218 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cpsf2O35218 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
Cpsf2O35218 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cpsf2O35218 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cpsf2O35218 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cpsf2O35218 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC15.57■□□□□ 0.08
Cpsf2O35218 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cpsf2O35218 AC167013.2-201ENSMUST00000228520 2684 ntBASIC15.57■□□□□ 0.08
Cpsf2O35218 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cpsf2O35218 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cpsf2O35218 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cpsf2O35218 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC15.57■□□□□ 0.08
Cpsf2O35218 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Cpsf2O35218 Gm27300-201ENSMUST00000184085 97 ntBASIC15.57■□□□□ 0.08
Cpsf2O35218 Gm27335-201ENSMUST00000184758 97 ntBASIC15.57■□□□□ 0.08
Cpsf2O35218 Gm27628-201ENSMUST00000184911 107 ntBASIC15.57■□□□□ 0.08
Cpsf2O35218 Gm28659-201ENSMUST00000188013 759 ntBASIC15.57■□□□□ 0.08
Cpsf2O35218 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC15.57■□□□□ 0.08
Cpsf2O35218 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cpsf2O35218 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cpsf2O35218 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cpsf2O35218 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cpsf2O35218 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cpsf2O35218 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cpsf2O35218 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Cpsf2O35218 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Cpsf2O35218 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cpsf2O35218 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cpsf2O35218 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cpsf2O35218 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cpsf2O35218 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cpsf2O35218 Gm45779-201ENSMUST00000212189 4064 ntBASIC15.56■□□□□ 0.08
Cpsf2O35218 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
Cpsf2O35218 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cpsf2O35218 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cpsf2O35218 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC15.56■□□□□ 0.08
Cpsf2O35218 Mir5131-201ENSMUST00000175426 93 ntBASIC15.56■□□□□ 0.08
Cpsf2O35218 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC15.56■□□□□ 0.08
Cpsf2O35218 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Cpsf2O35218 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
Cpsf2O35218 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Cpsf2O35218 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cpsf2O35218 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cpsf2O35218 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC15.56■□□□□ 0.08
Cpsf2O35218 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Cpsf2O35218 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cpsf2O35218 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cpsf2O35218 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Cpsf2O35218 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cpsf2O35218 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Cpsf2O35218 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Cpsf2O35218 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cpsf2O35218 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cpsf2O35218 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC15.56■□□□□ 0.08
Cpsf2O35218 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cpsf2O35218 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Cpsf2O35218 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Cpsf2O35218 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cpsf2O35218 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cpsf2O35218 Gm38391-201ENSMUST00000191720 4069 ntBASIC15.55■□□□□ 0.08
Cpsf2O35218 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cpsf2O35218 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Cpsf2O35218 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cpsf2O35218 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cpsf2O35218 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cpsf2O35218 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cpsf2O35218 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cpsf2O35218 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cpsf2O35218 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Cpsf2O35218 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Cpsf2O35218 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cpsf2O35218 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC15.55■□□□□ 0.08
Cpsf2O35218 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cpsf2O35218 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 45.1 ms