Protein–RNA interactions for Protein: B2RQC2

Usp42, Ubiquitin carboxyl-terminal hydrolase 42, mousemouse

Known RBP Predictions only

Length 1,324 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp42B2RQC2 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Usp42B2RQC2 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Usp42B2RQC2 AC140397.2-201ENSMUST00000224213 834 ntBASIC17.01■□□□□ 0.31
Usp42B2RQC2 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Usp42B2RQC2 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Usp42B2RQC2 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Usp42B2RQC2 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Usp42B2RQC2 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Usp42B2RQC2 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Usp42B2RQC2 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Usp42B2RQC2 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Usp42B2RQC2 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Usp42B2RQC2 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Usp42B2RQC2 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Usp42B2RQC2 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Usp42B2RQC2 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Usp42B2RQC2 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC17.01■□□□□ 0.31
Usp42B2RQC2 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Usp42B2RQC2 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Usp42B2RQC2 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Usp42B2RQC2 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Usp42B2RQC2 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Usp42B2RQC2 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Usp42B2RQC2 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Usp42B2RQC2 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Usp42B2RQC2 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC17■□□□□ 0.31
Usp42B2RQC2 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Usp42B2RQC2 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC17■□□□□ 0.31
Usp42B2RQC2 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC17■□□□□ 0.31
Usp42B2RQC2 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC17■□□□□ 0.31
Usp42B2RQC2 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Usp42B2RQC2 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Usp42B2RQC2 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Usp42B2RQC2 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC17■□□□□ 0.31
Usp42B2RQC2 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC17■□□□□ 0.31
Usp42B2RQC2 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Usp42B2RQC2 Gm13823-201ENSMUST00000119930 345 ntBASIC17■□□□□ 0.31
Usp42B2RQC2 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC17■□□□□ 0.31
Usp42B2RQC2 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Usp42B2RQC2 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Usp42B2RQC2 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Usp42B2RQC2 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Usp42B2RQC2 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Usp42B2RQC2 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Usp42B2RQC2 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Usp42B2RQC2 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Usp42B2RQC2 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Usp42B2RQC2 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC17■□□□□ 0.31
Usp42B2RQC2 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Usp42B2RQC2 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Usp42B2RQC2 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Usp42B2RQC2 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Usp42B2RQC2 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Usp42B2RQC2 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Usp42B2RQC2 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Usp42B2RQC2 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Usp42B2RQC2 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC17■□□□□ 0.31
Usp42B2RQC2 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Usp42B2RQC2 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Usp42B2RQC2 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Usp42B2RQC2 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC16.99■□□□□ 0.31
Usp42B2RQC2 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Usp42B2RQC2 Mir449b-201ENSMUST00000104833 80 ntBASIC16.99■□□□□ 0.31
Usp42B2RQC2 Gm24158-201ENSMUST00000175263 71 ntBASIC16.99■□□□□ 0.31
Usp42B2RQC2 Gm18766-201ENSMUST00000189811 808 ntBASIC16.99■□□□□ 0.31
Usp42B2RQC2 Gm10253-201ENSMUST00000194270 940 ntBASIC16.99■□□□□ 0.31
Usp42B2RQC2 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Usp42B2RQC2 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Usp42B2RQC2 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Usp42B2RQC2 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Usp42B2RQC2 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Usp42B2RQC2 Gm45630-201ENSMUST00000210243 1911 ntBASIC16.99■□□□□ 0.31
Usp42B2RQC2 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC16.99■□□□□ 0.31
Usp42B2RQC2 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Usp42B2RQC2 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Usp42B2RQC2 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Usp42B2RQC2 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Usp42B2RQC2 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Usp42B2RQC2 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Usp42B2RQC2 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Usp42B2RQC2 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Usp42B2RQC2 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Usp42B2RQC2 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Usp42B2RQC2 Gm14701-201ENSMUST00000117156 348 ntBASIC16.98■□□□□ 0.31
Usp42B2RQC2 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Usp42B2RQC2 AC102291.3-201ENSMUST00000226566 405 ntBASIC16.98■□□□□ 0.31
Usp42B2RQC2 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Usp42B2RQC2 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Usp42B2RQC2 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
Usp42B2RQC2 Ptprs-211ENSMUST00000223859 5588 ntBASIC16.98■□□□□ 0.31
Usp42B2RQC2 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Usp42B2RQC2 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Usp42B2RQC2 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Usp42B2RQC2 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Usp42B2RQC2 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Usp42B2RQC2 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Usp42B2RQC2 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
Usp42B2RQC2 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Usp42B2RQC2 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Usp42B2RQC2 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms