Protein–RNA interactions for Protein: A0A0U1RP08

1700028J19Rik, RIKEN cDNA 1700028J19 gene (Fragment), mousemouse

Predictions only

Length 172 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
1700028J19RikA0A0U1RP08 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
1700028J19RikA0A0U1RP08 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
1700028J19RikA0A0U1RP08 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
1700028J19RikA0A0U1RP08 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
1700028J19RikA0A0U1RP08 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
1700028J19RikA0A0U1RP08 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
1700028J19RikA0A0U1RP08 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
1700028J19RikA0A0U1RP08 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
1700028J19RikA0A0U1RP08 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
1700028J19RikA0A0U1RP08 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
1700028J19RikA0A0U1RP08 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
1700028J19RikA0A0U1RP08 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
1700028J19RikA0A0U1RP08 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
1700028J19RikA0A0U1RP08 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC13.67□□□□□ -0.22
1700028J19RikA0A0U1RP08 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
1700028J19RikA0A0U1RP08 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
1700028J19RikA0A0U1RP08 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
1700028J19RikA0A0U1RP08 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
1700028J19RikA0A0U1RP08 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
1700028J19RikA0A0U1RP08 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
1700028J19RikA0A0U1RP08 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
1700028J19RikA0A0U1RP08 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
1700028J19RikA0A0U1RP08 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
1700028J19RikA0A0U1RP08 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
1700028J19RikA0A0U1RP08 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
1700028J19RikA0A0U1RP08 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC13.67□□□□□ -0.22
1700028J19RikA0A0U1RP08 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
1700028J19RikA0A0U1RP08 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
1700028J19RikA0A0U1RP08 Gm9727-201ENSMUST00000161387 555 ntBASIC13.67□□□□□ -0.22
1700028J19RikA0A0U1RP08 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
1700028J19RikA0A0U1RP08 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC13.67□□□□□ -0.22
1700028J19RikA0A0U1RP08 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC13.67□□□□□ -0.22
1700028J19RikA0A0U1RP08 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
1700028J19RikA0A0U1RP08 Gm44945-201ENSMUST00000206764 1187 ntBASIC13.67□□□□□ -0.22
1700028J19RikA0A0U1RP08 Gm45098-201ENSMUST00000207179 657 ntBASIC13.67□□□□□ -0.22
1700028J19RikA0A0U1RP08 Gm7461-201ENSMUST00000058918 827 ntBASIC13.67□□□□□ -0.22
1700028J19RikA0A0U1RP08 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
1700028J19RikA0A0U1RP08 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
1700028J19RikA0A0U1RP08 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
1700028J19RikA0A0U1RP08 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
1700028J19RikA0A0U1RP08 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
1700028J19RikA0A0U1RP08 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
1700028J19RikA0A0U1RP08 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
1700028J19RikA0A0U1RP08 Gm9252-201ENSMUST00000172364 1602 ntBASIC13.67□□□□□ -0.22
1700028J19RikA0A0U1RP08 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
1700028J19RikA0A0U1RP08 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
1700028J19RikA0A0U1RP08 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
1700028J19RikA0A0U1RP08 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
1700028J19RikA0A0U1RP08 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
1700028J19RikA0A0U1RP08 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
1700028J19RikA0A0U1RP08 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC13.67□□□□□ -0.22
1700028J19RikA0A0U1RP08 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
1700028J19RikA0A0U1RP08 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
1700028J19RikA0A0U1RP08 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
1700028J19RikA0A0U1RP08 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
1700028J19RikA0A0U1RP08 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
1700028J19RikA0A0U1RP08 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
1700028J19RikA0A0U1RP08 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
1700028J19RikA0A0U1RP08 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
1700028J19RikA0A0U1RP08 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
1700028J19RikA0A0U1RP08 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
1700028J19RikA0A0U1RP08 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
1700028J19RikA0A0U1RP08 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
1700028J19RikA0A0U1RP08 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC13.66□□□□□ -0.22
1700028J19RikA0A0U1RP08 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
1700028J19RikA0A0U1RP08 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC13.66□□□□□ -0.22
1700028J19RikA0A0U1RP08 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
1700028J19RikA0A0U1RP08 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
1700028J19RikA0A0U1RP08 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC13.66□□□□□ -0.22
1700028J19RikA0A0U1RP08 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC13.66□□□□□ -0.22
1700028J19RikA0A0U1RP08 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC13.66□□□□□ -0.22
1700028J19RikA0A0U1RP08 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC13.66□□□□□ -0.22
1700028J19RikA0A0U1RP08 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC13.66□□□□□ -0.22
1700028J19RikA0A0U1RP08 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
1700028J19RikA0A0U1RP08 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC13.66□□□□□ -0.22
1700028J19RikA0A0U1RP08 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
1700028J19RikA0A0U1RP08 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
1700028J19RikA0A0U1RP08 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
1700028J19RikA0A0U1RP08 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
1700028J19RikA0A0U1RP08 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
1700028J19RikA0A0U1RP08 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
1700028J19RikA0A0U1RP08 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
1700028J19RikA0A0U1RP08 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
1700028J19RikA0A0U1RP08 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
1700028J19RikA0A0U1RP08 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC13.66□□□□□ -0.22
1700028J19RikA0A0U1RP08 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
1700028J19RikA0A0U1RP08 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
1700028J19RikA0A0U1RP08 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
1700028J19RikA0A0U1RP08 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
1700028J19RikA0A0U1RP08 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
1700028J19RikA0A0U1RP08 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC13.65□□□□□ -0.22
1700028J19RikA0A0U1RP08 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
1700028J19RikA0A0U1RP08 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
1700028J19RikA0A0U1RP08 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
1700028J19RikA0A0U1RP08 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
1700028J19RikA0A0U1RP08 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
1700028J19RikA0A0U1RP08 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
1700028J19RikA0A0U1RP08 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC13.65□□□□□ -0.22
1700028J19RikA0A0U1RP08 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
1700028J19RikA0A0U1RP08 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms