Protein–RNA interactions for Protein: Q9R060

Nubp1, Cytosolic Fe-S cluster assembly factor NUBP1, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nubp1Q9R060 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC19,25■□□□□ 0,67
Nubp1Q9R060 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC19,25■□□□□ 0,67
Nubp1Q9R060 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC19,25■□□□□ 0,67
Nubp1Q9R060 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC19,25■□□□□ 0,67
Nubp1Q9R060 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC19,24■□□□□ 0,67
Nubp1Q9R060 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC19,24■□□□□ 0,67
Nubp1Q9R060 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC19,24■□□□□ 0,67
Nubp1Q9R060 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC19,24■□□□□ 0,67
Nubp1Q9R060 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC19,24■□□□□ 0,67
Nubp1Q9R060 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC19,24■□□□□ 0,67
Nubp1Q9R060 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC19,24■□□□□ 0,67
Nubp1Q9R060 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC19,24■□□□□ 0,67
Nubp1Q9R060 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC19,23■□□□□ 0,67
Nubp1Q9R060 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC19,23■□□□□ 0,67
Nubp1Q9R060 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC19,23■□□□□ 0,67
Nubp1Q9R060 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC19,23■□□□□ 0,67
Nubp1Q9R060 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC19,22■□□□□ 0,67
Nubp1Q9R060 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC19,22■□□□□ 0,67
Nubp1Q9R060 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC19,22■□□□□ 0,67
Nubp1Q9R060 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC19,22■□□□□ 0,67
Nubp1Q9R060 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC19,22■□□□□ 0,67
Nubp1Q9R060 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC19,22■□□□□ 0,67
Nubp1Q9R060 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC19,22■□□□□ 0,67
Nubp1Q9R060 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC19,22■□□□□ 0,67
Nubp1Q9R060 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC19,21■□□□□ 0,67
Nubp1Q9R060 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC19,21■□□□□ 0,67
Nubp1Q9R060 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC19,21■□□□□ 0,67
Nubp1Q9R060 Gm5131-201ENSMUST00000212776 1238 ntBASIC19,21■□□□□ 0,67
Nubp1Q9R060 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC19,21■□□□□ 0,67
Nubp1Q9R060 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC19,2■□□□□ 0,66
Nubp1Q9R060 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC19,2■□□□□ 0,66
Nubp1Q9R060 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC19,2■□□□□ 0,66
Nubp1Q9R060 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC19,2■□□□□ 0,66
Nubp1Q9R060 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC19,2■□□□□ 0,66
Nubp1Q9R060 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC19,2■□□□□ 0,66
Nubp1Q9R060 Gm43034-201ENSMUST00000198678 1364 ntBASIC19,19■□□□□ 0,66
Nubp1Q9R060 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC19,19■□□□□ 0,66
Nubp1Q9R060 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC19,19■□□□□ 0,66
Nubp1Q9R060 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC19,19■□□□□ 0,66
Nubp1Q9R060 Gm20634-201ENSMUST00000090779 2956 ntBASIC19,18■□□□□ 0,66
Nubp1Q9R060 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC19,18■□□□□ 0,66
Nubp1Q9R060 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC19,18■□□□□ 0,66
Nubp1Q9R060 Gm7417-201ENSMUST00000192950 473 ntBASIC19,18■□□□□ 0,66
Nubp1Q9R060 Gm5297-201ENSMUST00000198555 1171 ntBASIC19,18■□□□□ 0,66
Nubp1Q9R060 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC19,18■□□□□ 0,66
Nubp1Q9R060 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC19,18■□□□□ 0,66
Nubp1Q9R060 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC19,18■□□□□ 0,66
Nubp1Q9R060 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC19,17■□□□□ 0,66
Nubp1Q9R060 Gm4419-202ENSMUST00000226239 1431 ntBASIC19,17■□□□□ 0,66
Nubp1Q9R060 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC19,17■□□□□ 0,66
Nubp1Q9R060 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC19,17■□□□□ 0,66
Nubp1Q9R060 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC19,17■□□□□ 0,66
Nubp1Q9R060 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC19,17■□□□□ 0,66
Nubp1Q9R060 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC19,17■□□□□ 0,66
Nubp1Q9R060 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC19,16■□□□□ 0,66
Nubp1Q9R060 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC19,16■□□□□ 0,66
Nubp1Q9R060 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC19,16■□□□□ 0,66
Nubp1Q9R060 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC19,16■□□□□ 0,66
Nubp1Q9R060 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC19,16■□□□□ 0,66
Nubp1Q9R060 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC19,16■□□□□ 0,66
Nubp1Q9R060 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC19,16■□□□□ 0,66
Nubp1Q9R060 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC19,15■□□□□ 0,66
Nubp1Q9R060 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC19,15■□□□□ 0,66
Nubp1Q9R060 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC19,15■□□□□ 0,66
Nubp1Q9R060 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC19,15■□□□□ 0,66
Nubp1Q9R060 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC19,15■□□□□ 0,66
Nubp1Q9R060 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC19,15■□□□□ 0,66
Nubp1Q9R060 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC19,15■□□□□ 0,66
Nubp1Q9R060 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC19,15■□□□□ 0,66
Nubp1Q9R060 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC19,15■□□□□ 0,66
Nubp1Q9R060 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC19,15■□□□□ 0,66
Nubp1Q9R060 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC19,15■□□□□ 0,66
Nubp1Q9R060 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC19,14■□□□□ 0,65
Nubp1Q9R060 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC19,14■□□□□ 0,65
Nubp1Q9R060 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC19,14■□□□□ 0,65
Nubp1Q9R060 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC19,14■□□□□ 0,65
Nubp1Q9R060 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC19,14■□□□□ 0,65
Nubp1Q9R060 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC19,13■□□□□ 0,65
Nubp1Q9R060 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC19,13■□□□□ 0,65
Nubp1Q9R060 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC19,13■□□□□ 0,65
Nubp1Q9R060 Gm9847-201ENSMUST00000052528 599 ntBASIC19,13■□□□□ 0,65
Nubp1Q9R060 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC19,13■□□□□ 0,65
Nubp1Q9R060 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC19,13■□□□□ 0,65
Nubp1Q9R060 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC19,13■□□□□ 0,65
Nubp1Q9R060 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC19,13■□□□□ 0,65
Nubp1Q9R060 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC19,12■□□□□ 0,65
Nubp1Q9R060 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC19,12■□□□□ 0,65
Nubp1Q9R060 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC19,12■□□□□ 0,65
Nubp1Q9R060 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC19,12■□□□□ 0,65
Nubp1Q9R060 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC19,12■□□□□ 0,65
Nubp1Q9R060 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC19,12■□□□□ 0,65
Nubp1Q9R060 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC19,11■□□□□ 0,65
Nubp1Q9R060 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC19,11■□□□□ 0,65
Nubp1Q9R060 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC19,11■□□□□ 0,65
Nubp1Q9R060 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC19,11■□□□□ 0,65
Nubp1Q9R060 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC19,1■□□□□ 0,65
Nubp1Q9R060 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC19,1■□□□□ 0,65
Nubp1Q9R060 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC19,1■□□□□ 0,65
Nubp1Q9R060 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC19,1■□□□□ 0,65
Nubp1Q9R060 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC19,1■□□□□ 0,65
Retrieved 100 of 76,532 protein–RNA pairs in 15,8 ms