Protein–RNA interactions for Protein: Q9QXN0

Shroom3, Protein Shroom3, mousemouse

Predictions only

Length 1,986 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom3Q9QXN0 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC22.37■■□□□ 1.17
Shroom3Q9QXN0 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Shroom3Q9QXN0 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC22.37■■□□□ 1.17
Shroom3Q9QXN0 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC22.37■■□□□ 1.17
Shroom3Q9QXN0 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Shroom3Q9QXN0 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC22.36■■□□□ 1.17
Shroom3Q9QXN0 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC22.36■■□□□ 1.17
Shroom3Q9QXN0 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Shroom3Q9QXN0 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Shroom3Q9QXN0 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Shroom3Q9QXN0 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC22.36■■□□□ 1.17
Shroom3Q9QXN0 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC22.35■■□□□ 1.17
Shroom3Q9QXN0 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC22.35■■□□□ 1.17
Shroom3Q9QXN0 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC22.35■■□□□ 1.17
Shroom3Q9QXN0 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC22.34■■□□□ 1.17
Shroom3Q9QXN0 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Shroom3Q9QXN0 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
Shroom3Q9QXN0 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC22.33■■□□□ 1.17
Shroom3Q9QXN0 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC22.33■■□□□ 1.17
Shroom3Q9QXN0 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC22.33■■□□□ 1.17
Shroom3Q9QXN0 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC22.33■■□□□ 1.17
Shroom3Q9QXN0 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC22.33■■□□□ 1.17
Shroom3Q9QXN0 Gm5812-201ENSMUST00000061073 957 ntBASIC22.33■■□□□ 1.17
Shroom3Q9QXN0 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC22.33■■□□□ 1.16
Shroom3Q9QXN0 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC22.33■■□□□ 1.16
Shroom3Q9QXN0 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC22.32■■□□□ 1.16
Shroom3Q9QXN0 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC22.32■■□□□ 1.16
Shroom3Q9QXN0 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Shroom3Q9QXN0 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
Shroom3Q9QXN0 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC22.32■■□□□ 1.16
Shroom3Q9QXN0 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC22.32■■□□□ 1.16
Shroom3Q9QXN0 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Shroom3Q9QXN0 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
Shroom3Q9QXN0 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC22.32■■□□□ 1.16
Shroom3Q9QXN0 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC22.31■■□□□ 1.16
Shroom3Q9QXN0 Gm5067-201ENSMUST00000170449 1009 ntBASIC22.31■■□□□ 1.16
Shroom3Q9QXN0 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Shroom3Q9QXN0 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Shroom3Q9QXN0 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Shroom3Q9QXN0 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC22.3■■□□□ 1.16
Shroom3Q9QXN0 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Shroom3Q9QXN0 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Shroom3Q9QXN0 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC22.29■■□□□ 1.16
Shroom3Q9QXN0 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Shroom3Q9QXN0 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC22.29■■□□□ 1.16
Shroom3Q9QXN0 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Shroom3Q9QXN0 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Shroom3Q9QXN0 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Shroom3Q9QXN0 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Shroom3Q9QXN0 Gm5921-201ENSMUST00000075898 882 ntBASIC22.28■■□□□ 1.16
Shroom3Q9QXN0 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC22.28■■□□□ 1.16
Shroom3Q9QXN0 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC22.28■■□□□ 1.16
Shroom3Q9QXN0 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Shroom3Q9QXN0 Gm44428-201ENSMUST00000204474 874 ntBASIC22.27■■□□□ 1.16
Shroom3Q9QXN0 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Shroom3Q9QXN0 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Shroom3Q9QXN0 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC22.27■■□□□ 1.15
Shroom3Q9QXN0 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC22.26■■□□□ 1.15
Shroom3Q9QXN0 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC22.26■■□□□ 1.15
Shroom3Q9QXN0 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Shroom3Q9QXN0 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC22.26■■□□□ 1.15
Shroom3Q9QXN0 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Shroom3Q9QXN0 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Shroom3Q9QXN0 Gm7199-201ENSMUST00000118327 1485 ntBASIC22.25■■□□□ 1.15
Shroom3Q9QXN0 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC22.25■■□□□ 1.15
Shroom3Q9QXN0 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC22.25■■□□□ 1.15
Shroom3Q9QXN0 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Shroom3Q9QXN0 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Shroom3Q9QXN0 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC22.24■■□□□ 1.15
Shroom3Q9QXN0 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Shroom3Q9QXN0 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Shroom3Q9QXN0 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Shroom3Q9QXN0 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC22.23■■□□□ 1.15
Shroom3Q9QXN0 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC22.23■■□□□ 1.15
Shroom3Q9QXN0 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Shroom3Q9QXN0 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Shroom3Q9QXN0 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Shroom3Q9QXN0 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC22.21■■□□□ 1.15
Shroom3Q9QXN0 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC22.21■■□□□ 1.15
Shroom3Q9QXN0 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Shroom3Q9QXN0 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC22.21■■□□□ 1.15
Shroom3Q9QXN0 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC22.21■■□□□ 1.15
Shroom3Q9QXN0 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC22.2■■□□□ 1.15
Shroom3Q9QXN0 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.15
Shroom3Q9QXN0 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Shroom3Q9QXN0 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
Shroom3Q9QXN0 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
Shroom3Q9QXN0 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Shroom3Q9QXN0 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Shroom3Q9QXN0 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Shroom3Q9QXN0 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Shroom3Q9QXN0 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Shroom3Q9QXN0 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
Shroom3Q9QXN0 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Shroom3Q9QXN0 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC22.19■■□□□ 1.14
Shroom3Q9QXN0 Gm22567-201ENSMUST00000175542 342 ntBASIC22.19■■□□□ 1.14
Shroom3Q9QXN0 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Shroom3Q9QXN0 Gm6934-201ENSMUST00000194780 1905 ntBASIC22.18■■□□□ 1.14
Shroom3Q9QXN0 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Shroom3Q9QXN0 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms