Protein–RNA interactions for Protein: Q9EQH3

Vps35, Vacuolar protein sorting-associated protein 35, mousemouse

Known RBP Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps35Q9EQH3 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Vps35Q9EQH3 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC22.03■■□□□ 1.12
Vps35Q9EQH3 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Vps35Q9EQH3 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC22.03■■□□□ 1.12
Vps35Q9EQH3 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Vps35Q9EQH3 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC22.02■■□□□ 1.12
Vps35Q9EQH3 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Vps35Q9EQH3 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Vps35Q9EQH3 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
Vps35Q9EQH3 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Vps35Q9EQH3 Gm14523-201ENSMUST00000117260 558 ntBASIC22.01■■□□□ 1.11
Vps35Q9EQH3 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Vps35Q9EQH3 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Vps35Q9EQH3 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Vps35Q9EQH3 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC22■■□□□ 1.11
Vps35Q9EQH3 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC22■■□□□ 1.11
Vps35Q9EQH3 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC22■■□□□ 1.11
Vps35Q9EQH3 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC22■■□□□ 1.11
Vps35Q9EQH3 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Vps35Q9EQH3 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC22■■□□□ 1.11
Vps35Q9EQH3 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Vps35Q9EQH3 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC21.99■■□□□ 1.11
Vps35Q9EQH3 Cap2-205ENSMUST00000225824 1634 ntBASIC21.99■■□□□ 1.11
Vps35Q9EQH3 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Vps35Q9EQH3 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Vps35Q9EQH3 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Vps35Q9EQH3 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Vps35Q9EQH3 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Vps35Q9EQH3 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Vps35Q9EQH3 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Vps35Q9EQH3 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
Vps35Q9EQH3 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
Vps35Q9EQH3 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC21.97■■□□□ 1.11
Vps35Q9EQH3 Gm7199-201ENSMUST00000118327 1485 ntBASIC21.97■■□□□ 1.11
Vps35Q9EQH3 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Vps35Q9EQH3 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Vps35Q9EQH3 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Vps35Q9EQH3 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
Vps35Q9EQH3 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Vps35Q9EQH3 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC21.97■■□□□ 1.11
Vps35Q9EQH3 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC21.97■■□□□ 1.11
Vps35Q9EQH3 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
Vps35Q9EQH3 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC21.96■■□□□ 1.11
Vps35Q9EQH3 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Vps35Q9EQH3 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
Vps35Q9EQH3 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC21.96■■□□□ 1.11
Vps35Q9EQH3 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Vps35Q9EQH3 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC21.96■■□□□ 1.11
Vps35Q9EQH3 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC21.96■■□□□ 1.11
Vps35Q9EQH3 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Vps35Q9EQH3 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC21.96■■□□□ 1.11
Vps35Q9EQH3 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Vps35Q9EQH3 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Vps35Q9EQH3 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Vps35Q9EQH3 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.1
Vps35Q9EQH3 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Vps35Q9EQH3 Gm7332-201ENSMUST00000118351 454 ntBASIC21.95■■□□□ 1.1
Vps35Q9EQH3 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC21.95■■□□□ 1.1
Vps35Q9EQH3 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Vps35Q9EQH3 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Vps35Q9EQH3 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Vps35Q9EQH3 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Vps35Q9EQH3 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
Vps35Q9EQH3 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Vps35Q9EQH3 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Vps35Q9EQH3 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC21.94■■□□□ 1.1
Vps35Q9EQH3 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC21.94■■□□□ 1.1
Vps35Q9EQH3 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC21.93■■□□□ 1.1
Vps35Q9EQH3 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Vps35Q9EQH3 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
Vps35Q9EQH3 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC21.93■■□□□ 1.1
Vps35Q9EQH3 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Vps35Q9EQH3 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Vps35Q9EQH3 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC21.93■■□□□ 1.1
Vps35Q9EQH3 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC21.92■■□□□ 1.1
Vps35Q9EQH3 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
Vps35Q9EQH3 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Vps35Q9EQH3 AC117769.4-201ENSMUST00000225679 685 ntBASIC21.92■■□□□ 1.1
Vps35Q9EQH3 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Vps35Q9EQH3 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Vps35Q9EQH3 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC21.91■■□□□ 1.1
Vps35Q9EQH3 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Vps35Q9EQH3 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Vps35Q9EQH3 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Vps35Q9EQH3 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC21.9■■□□□ 1.1
Vps35Q9EQH3 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
Vps35Q9EQH3 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
Vps35Q9EQH3 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Vps35Q9EQH3 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.1
Vps35Q9EQH3 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Vps35Q9EQH3 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Vps35Q9EQH3 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Vps35Q9EQH3 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Vps35Q9EQH3 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Vps35Q9EQH3 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC21.88■■□□□ 1.09
Vps35Q9EQH3 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Vps35Q9EQH3 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
Vps35Q9EQH3 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
Vps35Q9EQH3 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
Vps35Q9EQH3 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC21.87■■□□□ 1.09
Retrieved 100 of 76,532 protein–RNA pairs in 69.3 ms