Protein–RNA interactions for Protein: Q9EQ80

Nif3l1, NIF3-like protein 1, mousemouse

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nif3l1Q9EQ80 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Nif3l1Q9EQ80 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC21.94■■□□□ 1.1
Nif3l1Q9EQ80 Gm27502-201ENSMUST00000183495 199 ntBASIC21.94■■□□□ 1.1
Nif3l1Q9EQ80 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Nif3l1Q9EQ80 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
Nif3l1Q9EQ80 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
Nif3l1Q9EQ80 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Nif3l1Q9EQ80 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Nif3l1Q9EQ80 AC117769.4-201ENSMUST00000225679 685 ntBASIC21.93■■□□□ 1.1
Nif3l1Q9EQ80 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Nif3l1Q9EQ80 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC21.93■■□□□ 1.1
Nif3l1Q9EQ80 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC21.93■■□□□ 1.1
Nif3l1Q9EQ80 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC21.93■■□□□ 1.1
Nif3l1Q9EQ80 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Nif3l1Q9EQ80 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Nif3l1Q9EQ80 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
Nif3l1Q9EQ80 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
Nif3l1Q9EQ80 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
Nif3l1Q9EQ80 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
Nif3l1Q9EQ80 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Nif3l1Q9EQ80 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC21.91■■□□□ 1.1
Nif3l1Q9EQ80 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Nif3l1Q9EQ80 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Nif3l1Q9EQ80 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
Nif3l1Q9EQ80 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Nif3l1Q9EQ80 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Nif3l1Q9EQ80 Gm6934-201ENSMUST00000194780 1905 ntBASIC21.9■■□□□ 1.1
Nif3l1Q9EQ80 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Nif3l1Q9EQ80 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Nif3l1Q9EQ80 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
Nif3l1Q9EQ80 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC21.89■■□□□ 1.09
Nif3l1Q9EQ80 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC21.89■■□□□ 1.09
Nif3l1Q9EQ80 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Nif3l1Q9EQ80 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
Nif3l1Q9EQ80 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC21.88■■□□□ 1.09
Nif3l1Q9EQ80 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Nif3l1Q9EQ80 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Nif3l1Q9EQ80 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
Nif3l1Q9EQ80 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Nif3l1Q9EQ80 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
Nif3l1Q9EQ80 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Nif3l1Q9EQ80 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Nif3l1Q9EQ80 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Nif3l1Q9EQ80 Gm14523-201ENSMUST00000117260 558 ntBASIC21.86■■□□□ 1.09
Nif3l1Q9EQ80 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC21.86■■□□□ 1.09
Nif3l1Q9EQ80 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Nif3l1Q9EQ80 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
Nif3l1Q9EQ80 Gm28731-201ENSMUST00000185564 1569 ntBASIC21.86■■□□□ 1.09
Nif3l1Q9EQ80 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC21.85■■□□□ 1.09
Nif3l1Q9EQ80 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Nif3l1Q9EQ80 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Nif3l1Q9EQ80 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Nif3l1Q9EQ80 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Nif3l1Q9EQ80 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC21.84■■□□□ 1.09
Nif3l1Q9EQ80 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
Nif3l1Q9EQ80 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
Nif3l1Q9EQ80 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Nif3l1Q9EQ80 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC21.84■■□□□ 1.09
Nif3l1Q9EQ80 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Nif3l1Q9EQ80 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Nif3l1Q9EQ80 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC21.84■■□□□ 1.09
Nif3l1Q9EQ80 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Nif3l1Q9EQ80 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Nif3l1Q9EQ80 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Nif3l1Q9EQ80 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC21.83■■□□□ 1.08
Nif3l1Q9EQ80 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
Nif3l1Q9EQ80 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Nif3l1Q9EQ80 AC153524.1-201ENSMUST00000220436 1935 ntBASIC21.82■■□□□ 1.08
Nif3l1Q9EQ80 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Nif3l1Q9EQ80 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Nif3l1Q9EQ80 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Nif3l1Q9EQ80 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Nif3l1Q9EQ80 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC21.82■■□□□ 1.08
Nif3l1Q9EQ80 Gm7332-201ENSMUST00000118351 454 ntBASIC21.82■■□□□ 1.08
Nif3l1Q9EQ80 Gm12366-201ENSMUST00000121722 873 ntBASIC21.82■■□□□ 1.08
Nif3l1Q9EQ80 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC21.82■■□□□ 1.08
Nif3l1Q9EQ80 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC21.82■■□□□ 1.08
Nif3l1Q9EQ80 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC21.82■■□□□ 1.08
Nif3l1Q9EQ80 Gm5786-201ENSMUST00000085368 882 ntBASIC21.82■■□□□ 1.08
Nif3l1Q9EQ80 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
Nif3l1Q9EQ80 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Nif3l1Q9EQ80 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Nif3l1Q9EQ80 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Nif3l1Q9EQ80 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
Nif3l1Q9EQ80 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Nif3l1Q9EQ80 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC21.81■■□□□ 1.08
Nif3l1Q9EQ80 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Nif3l1Q9EQ80 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Nif3l1Q9EQ80 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Nif3l1Q9EQ80 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
Nif3l1Q9EQ80 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
Nif3l1Q9EQ80 H3f3aos-201ENSMUST00000097448 2905 ntBASIC21.8■■□□□ 1.08
Nif3l1Q9EQ80 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC21.8■■□□□ 1.08
Nif3l1Q9EQ80 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Nif3l1Q9EQ80 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Nif3l1Q9EQ80 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Nif3l1Q9EQ80 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
Nif3l1Q9EQ80 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Nif3l1Q9EQ80 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Nif3l1Q9EQ80 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Retrieved 100 of 76,532 protein–RNA pairs in 44.6 ms