Protein–RNA interactions for Protein: Q9D413

Sh2d6, SH2 domain-containing protein 6, mousemouse

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2d6Q9D413 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Sh2d6Q9D413 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Sh2d6Q9D413 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Sh2d6Q9D413 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Sh2d6Q9D413 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Sh2d6Q9D413 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Sh2d6Q9D413 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Sh2d6Q9D413 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Sh2d6Q9D413 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sh2d6Q9D413 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sh2d6Q9D413 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC18.32■□□□□ 0.52
Sh2d6Q9D413 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC18.32■□□□□ 0.52
Sh2d6Q9D413 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Sh2d6Q9D413 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sh2d6Q9D413 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Sh2d6Q9D413 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Sh2d6Q9D413 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sh2d6Q9D413 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sh2d6Q9D413 Gm10420-201ENSMUST00000121713 882 ntBASIC18.31■□□□□ 0.52
Sh2d6Q9D413 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC18.31■□□□□ 0.52
Sh2d6Q9D413 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sh2d6Q9D413 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sh2d6Q9D413 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sh2d6Q9D413 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Sh2d6Q9D413 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Sh2d6Q9D413 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC18.3■□□□□ 0.52
Sh2d6Q9D413 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Sh2d6Q9D413 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Sh2d6Q9D413 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Sh2d6Q9D413 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Sh2d6Q9D413 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Sh2d6Q9D413 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Sh2d6Q9D413 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Sh2d6Q9D413 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC18.29■□□□□ 0.52
Sh2d6Q9D413 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Sh2d6Q9D413 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Sh2d6Q9D413 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Sh2d6Q9D413 Gm5067-201ENSMUST00000170449 1009 ntBASIC18.28■□□□□ 0.52
Sh2d6Q9D413 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Sh2d6Q9D413 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Sh2d6Q9D413 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Sh2d6Q9D413 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Sh2d6Q9D413 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Sh2d6Q9D413 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
Sh2d6Q9D413 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Sh2d6Q9D413 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Sh2d6Q9D413 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
Sh2d6Q9D413 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Sh2d6Q9D413 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Sh2d6Q9D413 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Sh2d6Q9D413 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
Sh2d6Q9D413 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Sh2d6Q9D413 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Sh2d6Q9D413 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Sh2d6Q9D413 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Sh2d6Q9D413 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Sh2d6Q9D413 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Sh2d6Q9D413 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Sh2d6Q9D413 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Sh2d6Q9D413 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Sh2d6Q9D413 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Sh2d6Q9D413 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Sh2d6Q9D413 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Sh2d6Q9D413 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
Sh2d6Q9D413 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Sh2d6Q9D413 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC18.25■□□□□ 0.51
Sh2d6Q9D413 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Sh2d6Q9D413 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Sh2d6Q9D413 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Sh2d6Q9D413 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Sh2d6Q9D413 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Sh2d6Q9D413 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Sh2d6Q9D413 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Sh2d6Q9D413 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC18.24■□□□□ 0.51
Sh2d6Q9D413 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Sh2d6Q9D413 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Sh2d6Q9D413 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Sh2d6Q9D413 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Sh2d6Q9D413 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Sh2d6Q9D413 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Sh2d6Q9D413 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Sh2d6Q9D413 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Sh2d6Q9D413 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Sh2d6Q9D413 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC18.23■□□□□ 0.51
Sh2d6Q9D413 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Sh2d6Q9D413 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Sh2d6Q9D413 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Sh2d6Q9D413 Il17rd-202ENSMUST00000223942 2186 ntBASIC18.23■□□□□ 0.51
Sh2d6Q9D413 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Sh2d6Q9D413 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Sh2d6Q9D413 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Sh2d6Q9D413 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Sh2d6Q9D413 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Sh2d6Q9D413 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Sh2d6Q9D413 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Sh2d6Q9D413 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC18.21■□□□□ 0.51
Sh2d6Q9D413 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Sh2d6Q9D413 AC153524.1-201ENSMUST00000220436 1935 ntBASIC18.21■□□□□ 0.51
Sh2d6Q9D413 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Sh2d6Q9D413 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 10.4 ms