Protein–RNA interactions for Protein: Q9D3I0

5530400C23Rik, RIKEN cDNA 5530400C23 gene, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
5530400C23RikQ9D3I0 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
5530400C23RikQ9D3I0 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC21.66■■□□□ 1.06
5530400C23RikQ9D3I0 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
5530400C23RikQ9D3I0 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
5530400C23RikQ9D3I0 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
5530400C23RikQ9D3I0 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC21.65■■□□□ 1.06
5530400C23RikQ9D3I0 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC21.65■■□□□ 1.06
5530400C23RikQ9D3I0 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
5530400C23RikQ9D3I0 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
5530400C23RikQ9D3I0 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC21.64■■□□□ 1.06
5530400C23RikQ9D3I0 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
5530400C23RikQ9D3I0 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
5530400C23RikQ9D3I0 Gm7199-201ENSMUST00000118327 1485 ntBASIC21.64■■□□□ 1.05
5530400C23RikQ9D3I0 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
5530400C23RikQ9D3I0 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
5530400C23RikQ9D3I0 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
5530400C23RikQ9D3I0 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
5530400C23RikQ9D3I0 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
5530400C23RikQ9D3I0 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
5530400C23RikQ9D3I0 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
5530400C23RikQ9D3I0 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
5530400C23RikQ9D3I0 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
5530400C23RikQ9D3I0 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
5530400C23RikQ9D3I0 AC151971.4-201ENSMUST00000214717 704 ntBASIC21.61■■□□□ 1.05
5530400C23RikQ9D3I0 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
5530400C23RikQ9D3I0 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
5530400C23RikQ9D3I0 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
5530400C23RikQ9D3I0 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
5530400C23RikQ9D3I0 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
5530400C23RikQ9D3I0 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
5530400C23RikQ9D3I0 Gm6934-201ENSMUST00000194780 1905 ntBASIC21.6■■□□□ 1.05
5530400C23RikQ9D3I0 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
5530400C23RikQ9D3I0 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
5530400C23RikQ9D3I0 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC21.59■■□□□ 1.05
5530400C23RikQ9D3I0 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
5530400C23RikQ9D3I0 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
5530400C23RikQ9D3I0 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
5530400C23RikQ9D3I0 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
5530400C23RikQ9D3I0 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC21.58■■□□□ 1.05
5530400C23RikQ9D3I0 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
5530400C23RikQ9D3I0 Mir6538-201ENSMUST00000183713 110 ntBASIC21.58■■□□□ 1.05
5530400C23RikQ9D3I0 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
5530400C23RikQ9D3I0 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
5530400C23RikQ9D3I0 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC21.58■■□□□ 1.04
5530400C23RikQ9D3I0 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC21.58■■□□□ 1.04
5530400C23RikQ9D3I0 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC21.57■■□□□ 1.04
5530400C23RikQ9D3I0 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC21.57■■□□□ 1.04
5530400C23RikQ9D3I0 Gm27502-201ENSMUST00000183495 199 ntBASIC21.57■■□□□ 1.04
5530400C23RikQ9D3I0 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
5530400C23RikQ9D3I0 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
5530400C23RikQ9D3I0 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
5530400C23RikQ9D3I0 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
5530400C23RikQ9D3I0 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
5530400C23RikQ9D3I0 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
5530400C23RikQ9D3I0 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC21.55■■□□□ 1.04
5530400C23RikQ9D3I0 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC21.55■■□□□ 1.04
5530400C23RikQ9D3I0 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
5530400C23RikQ9D3I0 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
5530400C23RikQ9D3I0 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
5530400C23RikQ9D3I0 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC21.54■■□□□ 1.04
5530400C23RikQ9D3I0 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
5530400C23RikQ9D3I0 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
5530400C23RikQ9D3I0 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
5530400C23RikQ9D3I0 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
5530400C23RikQ9D3I0 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
5530400C23RikQ9D3I0 AC117769.4-201ENSMUST00000225679 685 ntBASIC21.53■■□□□ 1.04
5530400C23RikQ9D3I0 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
5530400C23RikQ9D3I0 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
5530400C23RikQ9D3I0 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
5530400C23RikQ9D3I0 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
5530400C23RikQ9D3I0 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC21.52■■□□□ 1.04
5530400C23RikQ9D3I0 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
5530400C23RikQ9D3I0 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
5530400C23RikQ9D3I0 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
5530400C23RikQ9D3I0 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
5530400C23RikQ9D3I0 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
5530400C23RikQ9D3I0 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
5530400C23RikQ9D3I0 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
5530400C23RikQ9D3I0 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
5530400C23RikQ9D3I0 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC21.5■■□□□ 1.03
5530400C23RikQ9D3I0 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
5530400C23RikQ9D3I0 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
5530400C23RikQ9D3I0 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
5530400C23RikQ9D3I0 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
5530400C23RikQ9D3I0 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
5530400C23RikQ9D3I0 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
5530400C23RikQ9D3I0 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
5530400C23RikQ9D3I0 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
5530400C23RikQ9D3I0 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
5530400C23RikQ9D3I0 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
5530400C23RikQ9D3I0 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
5530400C23RikQ9D3I0 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
5530400C23RikQ9D3I0 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
5530400C23RikQ9D3I0 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
5530400C23RikQ9D3I0 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
5530400C23RikQ9D3I0 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC21.48■■□□□ 1.03
5530400C23RikQ9D3I0 AC153524.1-201ENSMUST00000220436 1935 ntBASIC21.48■■□□□ 1.03
5530400C23RikQ9D3I0 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
5530400C23RikQ9D3I0 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
5530400C23RikQ9D3I0 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms