Protein–RNA interactions for Protein: Q9CZQ6

Raet1e, Retinoic acid early-inducible protein 1-epsilon, mousemouse

Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raet1eQ9CZQ6 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Raet1eQ9CZQ6 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Raet1eQ9CZQ6 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
Raet1eQ9CZQ6 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Raet1eQ9CZQ6 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Raet1eQ9CZQ6 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Raet1eQ9CZQ6 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Raet1eQ9CZQ6 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Raet1eQ9CZQ6 Gm9397-201ENSMUST00000200125 605 ntBASIC19.48■□□□□ 0.71
Raet1eQ9CZQ6 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Raet1eQ9CZQ6 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Raet1eQ9CZQ6 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Raet1eQ9CZQ6 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC19.47■□□□□ 0.71
Raet1eQ9CZQ6 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Raet1eQ9CZQ6 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Raet1eQ9CZQ6 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Raet1eQ9CZQ6 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Raet1eQ9CZQ6 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Raet1eQ9CZQ6 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Raet1eQ9CZQ6 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC19.45■□□□□ 0.7
Raet1eQ9CZQ6 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC19.45■□□□□ 0.7
Raet1eQ9CZQ6 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Raet1eQ9CZQ6 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC19.45■□□□□ 0.7
Raet1eQ9CZQ6 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC19.45■□□□□ 0.7
Raet1eQ9CZQ6 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC19.45■□□□□ 0.7
Raet1eQ9CZQ6 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Raet1eQ9CZQ6 AC153962.1-201ENSMUST00000218530 1948 ntBASIC19.45■□□□□ 0.7
Raet1eQ9CZQ6 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Raet1eQ9CZQ6 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Raet1eQ9CZQ6 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Raet1eQ9CZQ6 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Raet1eQ9CZQ6 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC19.44■□□□□ 0.7
Raet1eQ9CZQ6 AC153524.1-201ENSMUST00000220436 1935 ntBASIC19.44■□□□□ 0.7
Raet1eQ9CZQ6 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Raet1eQ9CZQ6 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Raet1eQ9CZQ6 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Raet1eQ9CZQ6 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Raet1eQ9CZQ6 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Raet1eQ9CZQ6 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Raet1eQ9CZQ6 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Raet1eQ9CZQ6 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Raet1eQ9CZQ6 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC19.42■□□□□ 0.7
Raet1eQ9CZQ6 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Raet1eQ9CZQ6 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Raet1eQ9CZQ6 Gm28731-201ENSMUST00000185564 1569 ntBASIC19.41■□□□□ 0.7
Raet1eQ9CZQ6 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Raet1eQ9CZQ6 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Raet1eQ9CZQ6 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Raet1eQ9CZQ6 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Raet1eQ9CZQ6 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Raet1eQ9CZQ6 Gm37136-201ENSMUST00000194368 194 ntBASIC19.4■□□□□ 0.7
Raet1eQ9CZQ6 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Raet1eQ9CZQ6 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Raet1eQ9CZQ6 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Raet1eQ9CZQ6 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Raet1eQ9CZQ6 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Raet1eQ9CZQ6 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Raet1eQ9CZQ6 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Raet1eQ9CZQ6 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Raet1eQ9CZQ6 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC19.39■□□□□ 0.69
Raet1eQ9CZQ6 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Raet1eQ9CZQ6 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.69
Raet1eQ9CZQ6 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Raet1eQ9CZQ6 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Raet1eQ9CZQ6 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Raet1eQ9CZQ6 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Raet1eQ9CZQ6 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC19.38■□□□□ 0.69
Raet1eQ9CZQ6 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Raet1eQ9CZQ6 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Raet1eQ9CZQ6 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Raet1eQ9CZQ6 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Raet1eQ9CZQ6 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Raet1eQ9CZQ6 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Raet1eQ9CZQ6 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Raet1eQ9CZQ6 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Raet1eQ9CZQ6 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC19.36■□□□□ 0.69
Raet1eQ9CZQ6 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Raet1eQ9CZQ6 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Raet1eQ9CZQ6 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC19.34■□□□□ 0.69
Raet1eQ9CZQ6 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Raet1eQ9CZQ6 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC19.34■□□□□ 0.69
Raet1eQ9CZQ6 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC19.34■□□□□ 0.69
Raet1eQ9CZQ6 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Raet1eQ9CZQ6 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Raet1eQ9CZQ6 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Raet1eQ9CZQ6 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Raet1eQ9CZQ6 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Raet1eQ9CZQ6 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Raet1eQ9CZQ6 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Raet1eQ9CZQ6 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Raet1eQ9CZQ6 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Raet1eQ9CZQ6 Gm37415-201ENSMUST00000192265 2054 ntBASIC19.32■□□□□ 0.68
Raet1eQ9CZQ6 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC19.32■□□□□ 0.68
Raet1eQ9CZQ6 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Raet1eQ9CZQ6 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Raet1eQ9CZQ6 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Raet1eQ9CZQ6 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Raet1eQ9CZQ6 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Raet1eQ9CZQ6 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Raet1eQ9CZQ6 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms