Protein–RNA interactions for Protein: Q9CXJ1

Ears2, Probable glutamate--tRNA ligase, mitochondrial, mousemouse

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ears2Q9CXJ1 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Ears2Q9CXJ1 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Ears2Q9CXJ1 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
Ears2Q9CXJ1 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC24.28■■□□□ 1.48
Ears2Q9CXJ1 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC24.28■■□□□ 1.48
Ears2Q9CXJ1 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Ears2Q9CXJ1 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Ears2Q9CXJ1 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC24.28■■□□□ 1.48
Ears2Q9CXJ1 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Ears2Q9CXJ1 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC24.27■■□□□ 1.48
Ears2Q9CXJ1 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
Ears2Q9CXJ1 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC24.27■■□□□ 1.48
Ears2Q9CXJ1 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC24.27■■□□□ 1.48
Ears2Q9CXJ1 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Ears2Q9CXJ1 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
Ears2Q9CXJ1 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC24.26■■□□□ 1.47
Ears2Q9CXJ1 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC24.26■■□□□ 1.47
Ears2Q9CXJ1 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC24.26■■□□□ 1.47
Ears2Q9CXJ1 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC24.26■■□□□ 1.47
Ears2Q9CXJ1 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Ears2Q9CXJ1 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Ears2Q9CXJ1 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
Ears2Q9CXJ1 Cap2-205ENSMUST00000225824 1634 ntBASIC24.25■■□□□ 1.47
Ears2Q9CXJ1 Gm14523-201ENSMUST00000117260 558 ntBASIC24.25■■□□□ 1.47
Ears2Q9CXJ1 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Ears2Q9CXJ1 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC24.24■■□□□ 1.47
Ears2Q9CXJ1 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC24.24■■□□□ 1.47
Ears2Q9CXJ1 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Ears2Q9CXJ1 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC24.23■■□□□ 1.47
Ears2Q9CXJ1 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC24.23■■□□□ 1.47
Ears2Q9CXJ1 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Ears2Q9CXJ1 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Ears2Q9CXJ1 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
Ears2Q9CXJ1 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC24.22■■□□□ 1.47
Ears2Q9CXJ1 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC24.22■■□□□ 1.47
Ears2Q9CXJ1 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Ears2Q9CXJ1 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Ears2Q9CXJ1 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Ears2Q9CXJ1 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Ears2Q9CXJ1 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Ears2Q9CXJ1 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Ears2Q9CXJ1 Gm7332-201ENSMUST00000118351 454 ntBASIC24.2■■□□□ 1.46
Ears2Q9CXJ1 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
Ears2Q9CXJ1 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC24.2■■□□□ 1.46
Ears2Q9CXJ1 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
Ears2Q9CXJ1 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC24.2■■□□□ 1.46
Ears2Q9CXJ1 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
Ears2Q9CXJ1 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Ears2Q9CXJ1 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
Ears2Q9CXJ1 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Ears2Q9CXJ1 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC24.19■■□□□ 1.46
Ears2Q9CXJ1 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Ears2Q9CXJ1 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Ears2Q9CXJ1 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC24.18■■□□□ 1.46
Ears2Q9CXJ1 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC24.18■■□□□ 1.46
Ears2Q9CXJ1 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC24.17■■□□□ 1.46
Ears2Q9CXJ1 AC153524.1-201ENSMUST00000220436 1935 ntBASIC24.17■■□□□ 1.46
Ears2Q9CXJ1 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC24.17■■□□□ 1.46
Ears2Q9CXJ1 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC24.17■■□□□ 1.46
Ears2Q9CXJ1 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC24.17■■□□□ 1.46
Ears2Q9CXJ1 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Ears2Q9CXJ1 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
Ears2Q9CXJ1 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC24.16■■□□□ 1.46
Ears2Q9CXJ1 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC24.16■■□□□ 1.46
Ears2Q9CXJ1 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC24.15■■□□□ 1.46
Ears2Q9CXJ1 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
Ears2Q9CXJ1 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC24.15■■□□□ 1.46
Ears2Q9CXJ1 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC24.15■■□□□ 1.46
Ears2Q9CXJ1 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Ears2Q9CXJ1 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC24.15■■□□□ 1.46
Ears2Q9CXJ1 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
Ears2Q9CXJ1 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC24.14■■□□□ 1.46
Ears2Q9CXJ1 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
Ears2Q9CXJ1 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
Ears2Q9CXJ1 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC24.14■■□□□ 1.45
Ears2Q9CXJ1 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
Ears2Q9CXJ1 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Ears2Q9CXJ1 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Ears2Q9CXJ1 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC24.13■■□□□ 1.45
Ears2Q9CXJ1 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC24.12■■□□□ 1.45
Ears2Q9CXJ1 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC24.12■■□□□ 1.45
Ears2Q9CXJ1 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC24.12■■□□□ 1.45
Ears2Q9CXJ1 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC24.12■■□□□ 1.45
Ears2Q9CXJ1 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC24.12■■□□□ 1.45
Ears2Q9CXJ1 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
Ears2Q9CXJ1 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Ears2Q9CXJ1 AC117769.4-201ENSMUST00000225679 685 ntBASIC24.1■■□□□ 1.45
Ears2Q9CXJ1 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC24.1■■□□□ 1.45
Ears2Q9CXJ1 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC24.1■■□□□ 1.45
Ears2Q9CXJ1 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC24.09■■□□□ 1.45
Ears2Q9CXJ1 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC24.09■■□□□ 1.45
Ears2Q9CXJ1 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
Ears2Q9CXJ1 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
Ears2Q9CXJ1 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
Ears2Q9CXJ1 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Ears2Q9CXJ1 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
Ears2Q9CXJ1 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC24.07■■□□□ 1.44
Ears2Q9CXJ1 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Ears2Q9CXJ1 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
Ears2Q9CXJ1 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC24.06■■□□□ 1.44
Retrieved 100 of 76,532 protein–RNA pairs in 54.1 ms